KEGG   Lates calcarifer (barramundi perch): 108898916
Entry
108898916         CDS       T04895                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108898916 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108898916 (kdm5ba)
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108898916 (kdm5ba)
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108898916 (kdm5ba)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108898916 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 108898916
NCBI-ProteinID: XP_018554562
UniProt: A0A4W6FWV4
LinkDB
Position
LG12:complement(20341717..20359150)
AA seq 1485 aa
MTQPQLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPEWQPPFACD
VDRLKFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTKISVKMGFAPGKAIGSHLRAHYERILYPYNLFQTGANLPKATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERGSVKTEPREVCENRPNLRRRMG
TCVAKPEPERRSEVKMEPIKHEDPTEYEETVLDKINKPPQNKVDQYMCLVCGSGSAEDRL
LLCDGCDDSYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPPVAFGFEQASRNYTLQAFGD
MADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRNGH
FEVSPEDEHYLSSGWNLNNMPVLDASVLTHVTADICGMKLPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGAPGYAAEHLESVMKKLAPELFESQPDLLHQLVTIMNPNTLMNN
GVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRNCVEHYRQLSRY
CVFSHDEMICNMACKADMMDVDLASSVHKDMTIMIKEEEELRLKIIKMGVEQSQQVDFEV
LPDEERQCYKCRTTCYLSGITCACSPSKMVCLYHTQDLCSCPRSNLTLHYKFTLDKLYPM
MVSVKLRAESYKEWVSTVQEILENKGDKKKGLEELHSLVEQAETKAFPQTSHLDQLRTVT
TEADKVAVMAQQLLNGKRQTRYRSGGGKSQNQNELTVEELRSFVRQLDSLPCTIRQAPLL
KDLLTRVDDFKQRSERLLSDESPSPLELQDLLDVSLGLDVELPQLPLLRERLEQARWLEA
VQQASSWPDSLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQWEEKVLSLIEAR
PYHSLETLDVALQEVENIPAYLPNCLQLKDVVTKAKKWLHEADALQLGGRIPVLDSLSEL
VLRAEGIPVRLDPLSRLEALVGDIQAWKESAAKTFLLKNSPFSLLEVLCPRCDVGAGHQK
SRSKKAKEAPQISKKGSTKLESLCDVERALSESKDSASAMTTLAEVRQREMEILLALRAS
NESKLVPAENCCTLSVCVCQKAPSGAMVQCELCREVFHHGCVETTADLEYGQAWLCPLCQ
RSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQACTEGALEKVSKMG
RVGPRISSHLTQEINGSSFYTEHQSVPLQGLGPELDELMVEGFLLQVTLPETEQLYRYLL
YKLAPLPSHSPPLGNDTEQDQQSPRGSPHHNKNGVSSLKKEVMNGQSKRTKRRKESSDSQ
HSDKAKKCRKKKSKKSKERSEETKRMGSPTHTVSDPAPSDSEEDYSLCAAPWCREPEGDE
VNWVQCDGSCNQWFHQICVGLSAERAEKEDYICISCTQPDYKRGE
NT seq 4458 nt   +upstreamnt  +downstreamnt
atgactcaacctcagctgaatgagttcattcctcctccggagtgccctgtttttgagccc
agctgggaggaattcgccgacccttttgcgtacatcaacaaaatacgacccattgcagag
aaaactggcatctgcaaggtccgcccgccgccggaatggcagccaccatttgcctgtgat
gttgacagactgaaattcacaccacggatacaaaggcttaatgaattggaggctcagacc
agagttaagctcaacttccttgatcaaatagcaaaattctgggagctccaaggatgcact
ctgaaaattcctcatgtggaaagaaagattttggatctttatcagctaaataagctggtg
aatgaagagggaggcttcgatgcagtctgcagagagagacgctggaccaagatatccgtc
aagatgggctttgctccaggcaaggcaattggctctcatctgcgggcacactatgagagg
atcctctacccatataacctgttccagactggagccaatctgcccaaggccaccttgacc
aatgacactaaagataaggagtacacccctcatgacctgccacagcgtcagtctgtccag
ccccaggagacctgcagcatcgctcgccgagcaaaacgaatgagatctgagagaggcagt
gttaaaactgaacctagagaagtttgtgagaatcgtcccaatctcagaaggaggatggga
acatgtgttgccaaaccagagcctgagagaaggtccgaggtgaaaatggaacccattaaa
catgaggatccaacagaatatgaagaaactgtattagacaagataaataaacctccccag
aataaagtggaccagtacatgtgcctggtatgtggcagtgggagtgccgaggaccgcctg
ctgttgtgtgatggctgtgatgatagctatcacatcttctgtctgatccctcccctccac
gatgttcccaaaggcgactggagatgtcccaagtgcctggctcaggaatgtggcaaacct
cctgtcgcttttggctttgagcaggccagcaggaactacaccctccaagcttttggagac
atggccgactccttcaagtctgattatttcaacatgccagttcatatggttcccacagag
ctggtggaaaaggagttctggcgtctagtcagcaccatcgaggaggatgtcactgtggag
tacggagcagacattgcctctaaggagtttgggagtggtttccctgtgaggaacggccat
tttgaagtctcccctgaggacgagcattacctgagcagcggctggaacctgaacaacatg
ccagtcctggatgcctctgtgctgactcacgttacagccgacatctgtgggatgaagtta
ccctggctgtacgtgggcatgtgcttctcctccttctgctggcatattgaggaccactgg
agctactccataaactatctccactggggggagccaaagacgtggtacggggctcctggt
tatgctgcagagcatcttgagtcggtcatgaagaaactggcccccgagctgtttgagtct
cagccagacctccttcaccagctggtcaccatcatgaatcccaacacgctgatgaacaat
ggcgtcccgatctatcgcaccaaccagtgtgcaggtgaatttgtcatcacttttcccaga
gcttaccacagcggattcaaccagggtttcaactttgctgaagctgtcaacttctgtaca
atggactggatgcccattggccgtaactgtgtggaacactatcgccagctgagcaggtac
tgtgtcttctcccacgatgagatgatttgtaacatggcctgtaaagcagacatgatggat
gttgacctggcatcgtcggtgcataaggatatgaccatcatgataaaagaagaagaggaa
ctaagactaaagataatcaaaatgggtgtggaacaatcacagcaagttgattttgaggtg
ctcccagacgaggagcggcagtgttacaagtgtcggaccacctgctacctgtctggcatc
acctgtgcctgcagtcccagcaagatggtttgtctgtaccacacccaggacctctgctcg
tgtcctcgtagcaacctcacactccattacaagtttacactggataagttgtaccccatg
atggtgtcagtgaagctgcgtgcagaatcatacaaagagtgggtcagtactgtgcaggag
atcctggagaacaaaggggacaagaaaaaaggtttggaagagcttcacagcctggtggag
caggcagaaacaaaggcgttcccacaaaccagccacctggatcagctacgtacagtcacc
acagaggctgataaagttgccgtgatggcacaacagcttctcaatgggaagaggcagacg
aggtatcgctctggaggaggaaagtctcaaaaccagaacgaattaacggtggaggaattg
aggtcttttgtccgacagttagacagcctgccttgtaccatccggcaggctcctttactc
aaggacctgttgacccgggtggatgacttcaagcagcgcagtgaacgtctcctctctgat
gagtcccccagcccgctggagcttcaggacctgctggatgtgagtctgggcctggatgtg
gagctgccgcagctgcccctactgagggagagactggagcaggctcgctggctggaggct
gtgcagcaagccagcagctggccagacagcctctgtctggacaccatgaggaggctgatt
gaccagggcgtcggtctggcccctcacagctccgtggagagagccatggctcgtctgcag
gagctgctaacggtgtcggagcagtgggaggagaaggtgctcagcctcatcgaggccagg
ccctatcacagcttagaaacacttgacgtggctctacaagaggtagaaaacatccctgct
tatctgcccaactgtctgcagctgaaggatgtcgtcaccaaggccaagaaatggttgcat
gaagccgacgcacttcagctcgggggacgtattccggtgctggacagcctctctgagctg
gttctcagagcagagggaatcccagtgaggctcgacccgctgagtcgattggaggccctt
gtcggcgacattcaggcctggaaagagagcgcagcaaagacattcctactgaaaaactcc
cccttctctctccttgaggtgctttgcccaagatgtgatgtaggggccgggcatcagaag
tcacgatctaaaaaagcaaaagaagctccgcagatcagtaaaaagggttcaacaaaactt
gagtctctgtgtgatgtggagagagcgctctctgagagcaaggattctgcttctgctatg
accactctagccgaggtccgccagagggagatggagatcttgttggctctgagggcctca
aacgaatctaagcttgttcctgctgaaaactgttgcacacttagcgtttgcgtttgccaa
aaggctccttcaggtgccatggtgcagtgtgagctctgtcgagaggttttccaccatggc
tgcgtggaaacgactgcagacctcgagtatggacaagcctggctttgccctctctgtcag
cggtcgagaaaaccccccctagacaaggtcctgcccctgcttgcttcgttgcagaggatc
cgggttcgacttccggaaggagacgccctgcgcttcctcatcgagaggacggtgcgatgg
cagcacagagtacagcaggcgtgcacagagggagcgctggagaaagtgtcaaagatgggg
agagttggacccaggatatcttcacatttgactcaggaaataaatggttcatcattttac
acagaacaccagtctgttccactccagggtcttggtcctgagctggatgagctgatggtg
gagggattcctgctgcaggtcactctgccggagaccgagcagctgtacagatacttactg
tacaaactggctcccctgccctcacatagcccccccctcgggaacgacacagaacaggac
caacagtctccaagagggagcccccaccacaacaagaacggagtctccagtctcaaaaag
gaggtgatgaacggtcagagcaaaaggaccaagcgacgtaaggaaagctctgactctcag
cacagcgacaaggccaagaagtgccgcaagaagaagtccaagaaaagcaaagaaaggagt
gaagaaaccaagaggatgggttctcccacacacacggtgtctgaccctgctccatcagac
tctgaggaggactattcactgtgtgctgcaccatggtgtagagagccagagggtgacgag
gtaaactgggtccagtgcgacggcagctgcaaccagtggttccaccagatctgtgtcgga
ctgtctgctgagcgagcagagaaggaggactatatttgcataagctgcacacagccagac
tacaaaagaggagaatga

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