Lates calcarifer (barramundi perch): 108898939
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Entry
108898939 CDS
T04895
Name
(RefSeq) translocon-associated protein subunit alpha
KO
K13249
translocon-associated protein subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108898939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898939
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
108898939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
108898939
NCBI-ProteinID:
XP_018554601
UniProt:
A0A4W6FUQ9
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Position
LG12:20181439..20186589
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AA seq
286 aa
AA seq
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MFNFGSKFLLLFLLAFPCGLISIGHVSAEPDSAEDIAEDADAAVDEEEDDEEVLVEEDQM
QASEGDEEESDEAADKLLTSHPDADTTIIFMTGEEFPANEIVRFLVGFTNKGSQDFNVQS
LEASFRYPQDFQFYIQNFTALPLNTRVQPQAQASFEYSFIPAQPMAGRPFGLVILLNYLD
NEGNMFQTAIYNQTVTITEREEGLDGETIFMYVFLAGLVVLMLFGMYQVLESRTKKRIPV
KIEKGTGGLSDVDISWIPQETLNAMNKASPKTSPRKRTKRAAGADQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttcgggtcaaaattcctgctgcttttcctcctggccttcccctgcggatta
atttccatcggccacgtctctgcagagccagactctgctgaagatattgctgaggatgct
gatgctgcagtggatgaagaagaagacgatgaagaggtccttgttgaggaggatcagatg
caagcctcggagggagacgaagaagagtcagacgaagctgctgataaactgttgacttct
catcctgacgccgacacaaccatcatcttcatgaccggagaagagtttcctgccaatgaa
attgtgaggttcctggttggtttcaccaacaagggaagtcaggatttcaatgtccagtca
ttggaggcctccttccgttacccccaggactttcagttctacattcagaatttcacagct
ttgcctttgaacaccagagtgcagcctcaggctcaggcctcctttgagtactccttcatc
ccagctcagcccatggctggtcgcccattcggcctcgttatccttctcaactatcttgac
aatgagggcaacatgttccagactgccatttacaaccaaactgtcaccatcactgagaga
gaagagggactggacggggaaacaatattcatgtacgtgttcctggctggactcgtggtc
ctgatgctctttggaatgtaccaggtcctggagtcgaggacgaaaaagagaatcccagtg
aaaatagagaagggcactggtgggctaagtgatgtggacatcagctggattcctcaggag
actctcaatgccatgaacaaggcttcccctaaaacgtctccacggaaacgaactaagagg
gcagctggagcagatcaataa
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