KEGG   Lates calcarifer (barramundi perch): 108899004
Entry
108899004         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A
  KO
K14005  protein transport protein SEC31
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108899004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108899004
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lcf02044]
    108899004
Membrane trafficking [BR:lcf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108899004
Secretion system [BR:lcf02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108899004
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_EIPR1 TPR_Sec16 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 MIOS_WD40 Prp18 Beta-prop_SCAP MukF_M Beta-prop_WDR11_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 108899004
NCBI-ProteinID: XP_018554710
UniProt: A0AAJ7QFC6
LinkDB
Position
LG23:complement(12236360..12248392)
AA seq 1179 aa
MDFSDPSLDMQLKGSLPTSNRLHSIVWVNFGMGADGTGGRLVGGSENGTLTVYNPEDIMN
SGAEAVVGQSDKHTGPVRALDFNPFQNNLLASGANDSEIYIWDLNNFSSPMTPGAKTQPA
EDISVVSWNRQVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQ
LVLASEDDRLPVIQMWDLRFATSPLKVLENHTRGILSISWSQADSELLLSSAKDNRILCW
NPNTGEVIYELPTTNQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADK
ISSSFDTMDPFGTGQVLPPLQVPQPAAQDTIVPPLKKPPKWVRRPVGASFAFGGKLITFE
NPKLPPAQSPQPIPRQVFVSQVTTETEFLQRSRELQAALQSGSFNNYCQAKIQNAKSDAE
QDIWKFLLVNFEDEARIKFLRLLGFSKDELEKKISKCLGKNFQPNGHGVDAKDLAEKMQR
LSTERSDEAAAVGDARTSGSVSPADFFSQTPKENSNFQIPVSCDTDGLISQALLVGNFEG
AVDLCLNDGRYAEAILLAISGGEELLKKTQQKYLSKQKNSISMLISSVVTQNWRDIVQSC
ELDNWKEALAALLTYAHPEDFARLCDTLGGRLEREGTEKRCLQACLCYICSGNVEKLVEC
WALHRDCSSPLGLEDLVEKVMMLRKSIERLRNSEVAVQSPILAEKLTCYAGILAAEGSLS
TAMTYLPENSDQPGIMMLRDRLFHAQEEAAIGQQPPNSFNRVSVSTAKPAPAAQAPAPKA
QIMSQYQPSAPSQVAAQPAQPPIPSVFTPQAAPTNTGPGLPPSSHVLPPSVTRPAMRPSY
PQYPAPAPGFLPHQPFQPQPMSMGGPSAFPPPGPSMPAANLSGPPLPPSSSTPGGLPPMP
SPGVPPTGFMPSTSVPSGLMPPSSQPGAPVPMYPGGLHNQGPAPPMASGPYTPLGSGYPQ
GGPGAPAVKPFPAPAVAPPPTGYFPWLNSQCDHQGPQEGWNDPPAVRGGPRKKKVPDNYT
PPAPITAPVMGFPVEAPQPHDHAQVPPGAPQEPSVQLLQQLPAERVEQKEIPAEHMVLKS
TFDSLVQRCQLAAGDPQTKRKLDDAAKRLGYLYDKLREQSLSHNILNGLHEISRCVASQN
YQRGLEVHTQVVSSSNFSEISAFMPILKVVMTIANKLGV
NT seq 3540 nt   +upstreamnt  +downstreamnt
atggatttttctgacccctctctggacatgcagttaaaagggtcattacccacctcaaac
aggttgcacagtattgtatgggtgaacttcggaatgggagcagatggtactggagggaga
ttggtcggtggcagtgaaaatggcacattgactgtatataacccagaggacataatgaac
tctggagcagaggcagtcgtgggacagtctgacaaacacacgggacccgttagagctctc
gatttcaacccttttcagaataatcttcttgcatcaggagcaaatgattcagagatatac
atctgggatttaaacaacttcagcagtccaatgacaccaggagcaaagacacagcctgct
gaagacatcagtgttgtgtcctggaacaggcaggttcagcacatcctggcttctgccaac
cccagcgggaaagcagttgtgtgggacctgagaaagaacgaaccgatcatcaagatcagt
gaccacagcaacaggatgcactgctcaggaatgctctggcacccagaggtggccactcaa
ttggtattggcctctgaagatgatcggctgccagtcatccagatgtgggacctccgtttt
gccacatcaccccttaaagtccttgagaaccacacaaggggaattctgtccatatcctgg
agccaagctgactctgagctcctgctgagcagtgctaaagacaaccgaatcctctgctgg
aatccaaacactggagaggtcatttatgaacttcccacgacgaaccagtggtgttttgat
gttcagtggtgccccaggaatccagccctgctttcagcagcatcgtttgatgggagaatc
actgtctactctgtgatgggaggcagcttgaaggctcagcagcaaagcacagctgataag
atatcctcgtcatttgatacaatggatccctttggtacagggcaggtgctgcctcccctt
caagttcctcagcctgcagcgcaggacaccatagtaccccctctgaagaagccacccaag
tgggtgcgcaggccagtgggggcctcctttgcttttggtggaaagctgataacctttgag
aatcccaagctgcctccagcgcagagcccccaacccatccccagacaagtgtttgtgagc
caggttaccacggagaccgagttcctccagcgctccagggagctgcaggcggcgctgcag
tcgggttccttcaacaactactgccaggccaagattcagaacgccaaatcagacgctgag
caagacatatggaagttccttctggttaattttgaggatgaagctcgcattaagttcctc
agacttctggggttcagcaaagatgagctggagaaaaagatttcaaaatgcctggggaag
aattttcagcccaacggacatggagtagatgccaaagatctggcagaaaagatgcagcgg
ctttccactgagaggtctgatgaagccgctgcagtaggtgatgccagaacatcaggctct
gtttccccagcagactttttcagtcagaccccgaaggaaaactccaacttccagatccct
gtatcatgtgacacagacgggttgataagccaggcactgctggttggtaattttgaggga
gctgtggacctgtgtctgaatgacggccgttacgctgaagccatcctcctggctatcagc
gggggagaggagctgctcaagaaaactcagcaaaaatacctaagcaagcaaaagaacagc
atttcaatgcttatatcatcagtggtgacccaaaactggagagacatagtgcaaagctgt
gaattggacaactggaaggaggctctggctgctcttctgacctatgcacaccctgaagac
tttgcccgtctctgcgatacgctgggaggccggctggagcgcgaggggacggagaaacgc
tgcctgcaggcctgtctgtgttacatctgctctgggaacgttgagaagctggtggagtgc
tgggccttgcatagagactgttcctcccctcttggtctagaggatctggttgagaaagta
atgatgctgcgcaagtcgattgaacgcctccgcaacagcgaggtggcagtccagagcccc
atcctggccgagaagctcacctgctacgccggcattcttgctgcagagggcagtctgtcc
actgccatgacctatttgcccgagaactcagaccaacctggaatcatgatgctgagagac
aggctgttccacgctcaggaagaggctgccattggacagcagcctccaaattccttcaac
agagtcagtgtgtcgacagccaagcctgctcctgctgctcaggctcctgcaccaaaagca
caaattatgagccagtaccagccctctgccccttcccaggtggctgcacaacctgcacag
cctcctattccatcggtttttactccacaagctgctccaaccaacactgggcctggtctg
ccaccctcttctcatgtactgccacccagtgtgacccgccctgctatgaggccttcctat
ccgcaatatcctgctccggctccaggtttccttcctcatcagccattccagcctcagcct
atgtccatgggtgggccctcagccttccctcctccaggtccttctatgccagcagctaac
ttatcaggacctccgctgccgccttcgtcatcgacccccggaggtctgccccccatgccc
agccccggggtgccaccgacaggcttcatgccatctacctctgtaccctcaggcctcatg
cctcccagctcccagcccggagccccagttcccatgtacccagggggcctacacaatcaa
gggcccgcacccccgatggcatctggtccctacactcctctcggatcagggtacccacag
ggaggccccggggctcctgctgtaaagcccttcccagcccctgctgtcgcccccccccct
acaggatattttccctggctgaattcccagtgtgaccatcaaggacctcaagaaggctgg
aatgacccaccagctgtgcgaggtggacccaggaagaagaaggtccctgataactacact
ccaccagcccccatcacagcccctgtgatgggattcccagtggaggcccctcagcctcac
gatcacgcccaggtcccccctggagctccccaggagcccagtgtgcagctcctccagcag
ctgccagcagagagggtggagcagaaagaaatcccagctgaacacatggtcctcaaatcc
acctttgacagcctggtgcagcgctgccagctagcagcgggagacccccaaacaaaaagg
aaacttgatgatgcagccaaacgcttgggatacctgtatgataagctgagggagcagtcg
ctgtctcacaacatcctgaacgggctccacgagatcagccgctgcgtggcgagccaaaac
taccagcgtggtctggaggtccacacccaggtggtcagcagcagcaacttcagcgagata
tccgccttcatgcccatcctcaaagtggtcatgaccatcgccaacaagctgggtgtctaa

DBGET integrated database retrieval system