Lates calcarifer (barramundi perch): 108899012
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Entry
108899012 CDS
T04895
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108899012 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108899012 (lrit1b)
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
108899012
NCBI-ProteinID:
XP_018554721
UniProt:
A0A4W6F593
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Position
LG23:complement(12460222..12466788)
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AA seq
652 aa
AA seq
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MSRHFTAAFCLALVFLPLLGSSCPAQCSCFFHKLSDGSKARSVLCNDPEITVVPPNFPTD
TSKLRIEKTAITRISSDNFHYLNNLEFLWMSFNSLNSLNIDSFRGLYNLDELRLDGNSLT
TFPWESLTDMPNLRLLDLHNNKISTIPPEATMYIKNITYLDLSSNSLVTIPADVLTMWLS
TKPPQDTDSSKLILGLHDNPWLCDCRLYDLVQFQKSPSSSVALIDTRLRCADPESLSGVL
FTEAELQRCQGPRVHTAVARVRSSLGNNVLLRCGTVGVPIPELSWSRADGKKMNGTVQEE
ISKEGIIWSILSVPAVSYRDSGKYVCKATNFVGTADAIISLVITDSFRSEETGGGVSKRN
RGKKPGGIGRAAYQEKLIARYVPPPTATAAQPIIEPLNGKSVTGKYEIESYSISDGASRG
RGKASDPQGPVEVERNVLSNLAANASSLQQAPEKRVVRSVKVIGDTDHTVSLNWRAPMAT
NTTEFSVLYAVFGERDMRRINVGAGKNRITIDGLVPKTKYIACVCVKGLIPKKEQCVIFS
TDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCQKLLGRQTKEMQDSYVTF
ETLGPGTKAKGMEGEYLTRLNPDESNRLLSARSSVDSEATARTEGPPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacattttactgccgctttttgcttggctttagtttttcttcctctgttgggg
agttcgtgtcctgcacaatgcagctgcttcttccacaaattgagcgacggatcaaaagcc
aggagtgtgctttgcaatgatccagaaatcacagtggttcctccaaatttccccactgac
acatcaaagcttcgtattgaaaaaacagccatcacaaggatttctagcgacaacttccac
tacctcaacaacctggagtttctctggatgtcttttaattcactgaattcactgaacatt
gacagtttccggggtctttacaacctggatgagctcaggctagatggaaactctctcacc
accttcccctgggagtctctgactgatatgccaaacctgaggctcctcgacttacacaac
aacaagatctccaccatacctccagaggccaccatgtacatcaagaatatcacctatctg
gacctatccagcaatagtctggtgaccattcctgctgacgttctcaccatgtggctgagc
acgaagccaccccaggacacagattcgtccaaactaattctcggtctccatgacaaccca
tggctgtgtgactgtcggctgtatgatctggttcagtttcagaagtccccatcatcatct
gtggctctaattgacaccagactgaggtgcgctgatccagagagcctgtcgggggttctt
ttcaccgaggcagaacttcagcggtgccagggccctcgggtgcacacggctgtggctcgt
gttcggagctcactggggaacaatgttctgctgcgctgtggcacagttggagtccccatc
cccgagctgtcctggagccgcgctgatggcaagaaaatgaatggcaccgttcaggaagag
atttcaaaagagggcatcatttggtcaattctgagcgtgcccgcagtctcctaccgtgac
tctgggaaatatgtatgcaaagcaaccaattttgtgggcactgcagacgccatcatctcc
ttggtgatcacagattcctttcggtcagaggagacaggtggtggtgtttctaagagaaac
agagggaagaaacctggtggcattggaagagcagcataccaggagaaacttattgccaga
tatgttcctccaccaactgccacagctgcacagcccatcatcgaacctctcaatggcaaa
agcgtgactgggaagtatgagatcgagagctacagcatctccgatggtgcttctcgggga
cgaggcaaggcgtcagaccctcaggggccggtggaggtggagcggaatgttttgagtaac
ttagcagctaatgcctcctccttgcagcaagctccagagaaaagggtagtgcgttcggtc
aaagtgattggtgacactgaccacacagtctccctgaactggcgagcccccatggccaca
aacaccacagaatttagtgtcctatatgctgtatttggtgaaagagacatgcgccggatc
aatgtgggtgccggaaagaaccggatcaccattgatggccttgtgcccaagacaaagtac
attgcttgcgtttgcgtcaaaggcctgatcccgaaaaaggagcagtgtgtaatcttctca
acagatgaggcagccagtgctagtggcactcagaagcttattaatgtggtggtgataaca
gtggcatgtgtgattgctgtccctctgacactgattgtgtgctgcggggcattaaagaag
cgctgccaaaagctactggggcgtcagaccaaggagatgcaggactcgtacgtcacattt
gagaccctcggccccgggaccaaagctaaagggatggagggcgagtatctgaccaggtta
aaccctgatgaatccaacaggctgctctcagcaaggtccagtgttgactcagaggccact
gccaggactgagggaccacctaatgagtacttctgctaa
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