Lates calcarifer (barramundi perch): 108899020
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Entry
108899020 CDS
T04895
Name
(RefSeq) C-terminal-binding protein 2 isoform X1
KO
K04496
C-terminal binding protein [EC:
1.1.1.428
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108899020
04330 Notch signaling pathway
108899020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899020
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.428 4-methylthio 2-oxobutanoate reductase (NADH)
108899020
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Macropinocytosis
Others
108899020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
108899020
NCBI-ProteinID:
XP_050922501
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All DBs
Position
LG23:complement(12781605..12870115)
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AA seq
449 aa
AA seq
DB search
MSLTDKHKVKRQRLDRICEGKVMSIRPQIMNGPMHPRPLVALLDGRDCTVEMPILKDLAT
VAFCDAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRIIIRIGSGYDNIDIKAA
GELGIAVCNIPSAAVEETADSTLCHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAA
RIRGETLGLIGFGRSGQAVAVRAKVFGFNVIFYDPYLQDGLERSLGVQRVYTLQDLLYQS
DCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALD
VHETEPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPDSLRNC
VNKEFFVTTAPWAVMDQPGVHPELNGAAYRYPPGVVGVAPGGIPGALEGMVPGGVPIAHT
LPSGTHPSQAPSPNQPSKHGETREHLTEQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgactgacaaacacaaagtgaagaggcagcggctggaccggatctgcgaaggt
aaagtgatgagtattcggccccaaatcatgaacgggccaatgcatccgcgccccctagtg
gcgctgctggatgggcgcgactgcaccgtggagatgcccatcctgaaagacttggcaact
gttgcattctgtgatgcccagtccacacaggagatacacgagaaggtgctcaatgaggca
gtgggagccatgatgtaccacaccattaccctgaccagagaggacctggaaaagttcaaa
gctctgcgtatcatcatccgcatcggcagtggctacgacaacattgacatcaaggctgct
ggagagctgggaatcgcagtctgtaacattccctcagcggctgtggaggagacggcagac
tccaccctgtgccacatcctcaacctttaccggcgaaacacctggctctaccaggctctc
cgggagggcacgcgggtccagagtgtggagcagatccgcgaggtggcgtccggcgctgcc
cgcatccgcggcgaaaccctcggcctcatcggcttcggccgttcgggtcaggcggtggcg
gtgcgagccaaggtttttggcttcaacgtcatattctacgacccctacctgcaggacggc
ctggagcgctcgctgggcgtccagcgcgtctacaccctgcaggacctgctctaccagagc
gactgcgtctccctgcactgcaacctgaacgaacacaaccaccacctcatcaacgacttc
accatcaaacagatgcgtcagggtgcgttcctggtcaacactgcgcggggaggtctggtg
gatgagaaggccttggcccaggcactgaaggagggcaggatacgtggagccgccttggac
gtccacgagacggagccctttagttttgctcagggcccgctgaaagacgctcccaacctg
atctgcacaccgcacacagcctggtacagcgagcaggcctctctggagatgagagaggcg
gccgccaccgagatccgaagagccatcaccggccgcatccctgacagcctaagaaactgc
gtcaacaaggagttttttgtcaccacggcaccatgggcggttatggatcaaccgggcgtt
caccccgagctcaacggcgccgcctacagatacccgccaggtgtggttggagtggctccg
ggcggcatcccgggggcgttagagggtatggtcccgggtggggtgcccatcgcccacacc
ctgccctctggtacacacccctcccaggccccgtcgcccaaccagccctccaaacacggc
gagaccagagagcacctcaccgagcaatag
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