Lates calcarifer (barramundi perch): 108899040
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Entry
108899040 CDS
T04895
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108899040 (dhx32a)
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108899040 (dhx32a)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108899040 (dhx32a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
108899040
NCBI-ProteinID:
XP_018554812
UniProt:
A0AAJ7QFQ8
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All DBs
Position
LG23:complement(12913731..12920873)
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AA seq
731 aa
AA seq
DB search
MSEENNSAEPDIHPESEECPGGEDSFGFGDDLELNQFDGLPFSSRYYKLLKERKALPVWK
VRCEFEDALVNNQLVVVCGTAKTGRSTQIPQWCAEFCLSAQYQHGMVVCTQTNRQQAVDL
ALRVADEMDVNIGHEVGYTIPLETCCSSDTVLRYCTDDMLLREMMSDPFLEHYGAIIIDQ
AHERTVSTDILLGLLKDILLQRPELRVVVLAIPPMTDKLLSHYGSIPLINLEASSPADVV
HSNGGNKDYFYSALRLVLEIHRAKEDGDVVVFFASAEEVQCAWSILQREGTRLGADLGQM
VPVVLYPDQGGFLPFLTKQPDSKRFRRVFLSTQQGEDMWWATESVNFVIDTGVQKKMVYN
PRIRANSEVLRLISQCQAEIRKQLSGPTGKCFCLYPEESQLPSENPPQILESNITPTVLF
LKRMEIAGLGQCDFLDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLDPQMAK
ALLASCEFDCVSEMLTIAAMLSAPSCFLKPPGGMTHEAVQCYRKFQHPEGDHFTLINIYN
AFKQSQREQYFSAEKWCHDYFLDHTALKTAEAIRSELSDTLNRIELPISEPSFGTKTNTL
NIKRALLAGFFMQIARDVDGSGNYFILAHKHMAQVHPLSSYGAQSQKLGLPEWVVFHEYT
LSENNCMRTVSEISPQVFIQMAPLYFFYNLPPSESKDLLQDMLDVNGSRKCKDDKQKADT
NSGSLSDTTDL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaaaataactcagcggagccagacattcaccctgaaagtgaagaatgcccc
gggggggaagattcattcggctttggagatgatctggagttgaatcagttcgacggcttg
cccttttcctcgcgttactacaaattactaaaagagaggaaggctctgcctgtgtggaag
gtcaggtgcgagtttgaggatgctctggtaaacaaccagttggttgttgtgtgtgggacg
gcgaagactgggaggagtacacagatcccacagtggtgtgcagagttctgcttgtctgcc
cagtaccagcatggcatggttgtgtgcacgcagaccaacaggcagcaggctgtagacctg
gccttgcgtgtggctgatgaaatggacgtcaacataggccatgaagtgggttacaccatc
cccctggagacctgctgctcctctgacactgttctgagatattgcactgatgatatgctg
ctgagggagatgatgtcagacccttttctggagcactatggggctattattattgaccag
gcccatgagaggacagttagcacagacattctactaggtctcctcaaggacatcctgctg
cagaggcctgaactcagggtggtggtcctcgccatcccgcccatgactgacaagctgctg
agccactacggcagcatcccgctcatcaatctggaggcctcgagtcctgctgacgtggtc
cacagcaacggtggcaacaaagactacttctactcagcactcagactggtgctggagatc
catcgagccaaagaggatggagatgttgtagtgttctttgcctcagctgaggaggtccaa
tgtgcctggagcatcctccagagagagggcaccaggctgggagcagacttgggccagatg
gtgcctgtggtcctgtacccagaccagggagggtttctgcctttcctgaccaagcaacca
gactccaagaggttcaggagagttttcctctctacccaacagggggaggacatgtggtgg
gctacagagtctgtcaactttgtcattgacacaggagtccagaaaaaaatggtgtacaat
ccaaggataagagctaactcagaggtactacgactcatcagtcaatgtcaggcagaaata
cgcaagcagctgtctgggccaacagggaagtgtttttgcttgtatccagaggagagccag
cttccttcagagaaccccccacaaatcttggagtcaaacattacaccaacagtccttttc
ctaaaaaggatggagatagctgggcttggacagtgcgatttcctcgacagaccagatcct
gagggtctcatgcaggcattagaggagctggactacctcgcagccttggatgacgatggc
aacttgtctgagattggcatcataatgtctgaaatccctctggaccctcagatggccaaa
gccctactagcatcctgcgagtttgactgtgtgagtgagatgttgacaatcgcagcgatg
ctgtcagcgccaagctgcttcctgaagccacctggtggaatgacccacgaggcagttcag
tgttacaggaagtttcagcaccctgaaggcgatcacttcaccctcataaacatctacaat
gccttcaaacaaagccagagagaacaatacttcagtgctgaaaagtggtgccatgactat
ttcctggatcacactgccctgaagacagctgaggctattagatctgagctgagtgatact
ttgaacaggatcgagcttcccatctctgagccctcctttggaaccaagactaacaccctc
aacatcaaaagagctctgctggctgggttcttcatgcagattgcccgggatgtggatgga
tcgggaaactacttcattttggcgcacaagcacatggcccaggtgcacccgctctccagc
tacggtgctcagtcacagaagctcgggctgcctgagtgggttgttttccacgagtatact
ctgtcagagaacaactgcatgagaacagtttcggaaatttcccctcaagtgttcattcaa
atggcaccactttacttcttctacaatctgccccctagtgaaagcaaagacctactgcaa
gacatgttggatgtaaacggatccagaaaatgtaaagatgacaaacaaaaagctgacacc
aacagcggctctctcagtgacaccacagacttatga
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