Lates calcarifer (barramundi perch): 108899057
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Entry
108899057 CDS
T04895
Symbol
gdf6b
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6-B
KO
K20012
growth differentiation factor 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108899057 (gdf6b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108899057 (gdf6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108899057 (gdf6b)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108899057 (gdf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
108899057
NCBI-ProteinID:
XP_018554842
UniProt:
A0AAJ7VHY2
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Position
LG3:18542919..18546512
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AA seq
414 aa
AA seq
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MDFYHFALLLCGALAFVWEIPCFQALAIFPPAAPKSSKVAKIFDGQEASRYFKEFHAPPS
IDKNNKAASKDLVEPHDYMLSIYKTFSTAEKLGLNASFFRSSKAANTIASFVDSGQDDLP
LSPLRRQQYLFDVSTLSEKAEVLGAELRIYTKVSGNFRISETGAXVDIQLLSCVDQQLLD
SKTLDLQDSHRPKWEVLDVWEIFKERQHLSQGKPFCLELRAMLDNPERELDLHLLGLHRH
GRPQQKKAILVVFTRSKKRQTLFSERREGRALLGLERKARERGPGIKASRRRRTAASKTR
HGKRHGKKSKSRCSKKPLHVNFRDLGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHA
IIQTLMNSMNPSNMPPSCCAPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggatttctatcacttcgccttactcttgtgtggggctcttgcgttcgtctgggaaatc
ccctgttttcaggctctcgctattttccctccagctgccccgaagagcagcaaggtggcg
aagatttttgatggacaagaagcgtctagatactttaaggagtttcacgcgccaccctcc
atcgacaaaaacaataaagcagcatctaaagacttagttgagcctcatgactacatgctg
tctatatacaagaccttctccaccgcggagaagctgggactgaacgccagtttttttcgc
tcttcaaaagctgcaaacactattgcaagttttgtggacagtggacaagatgacctccca
ctctcccctctgaggagacagcagtatctgttcgacgtctcaaccctctccgaaaaagcg
gaggtgctgggagccgagctcaggatatacaccaaagtgtctgggaatttcaggatatcc
gagacaggagccnncgtcgacatccagctcctctcctgcgtcgaccagcagctgctcgac
tccaaaacgctggacctgcaggattcccacaggccgaagtgggaggtgttggacgtgtgg
gaaattttcaaagagcggcagcacctgagccaggggaagcccttctgcctggagctcagg
gccatgctggacaaccctgagagggagctggacctgcatcttctgggtttgcacaggcat
ggcaggcctcagcagaagaaagccatcttagtggtcttcaccaggtctaagaagaggcag
actctcttcagtgagaggagagaagggagggcgttgctgggccttgagaggaaggcgaga
gagaggggccctggcatcaaggccagcaggaggaggaggacggctgcgtccaaaacccgc
cacgggaagagacacggcaaaaagtccaaatccaggtgcagcaagaagccgctgcacgtc
aacttcagagacctgggctgggatgactggatcatcgccccgctggattacgaggcgtac
cactgcgagggcgtgtgcgacttccccctgcgctcccacctggagcccaccaaccacgcc
atcatccaaaccctgatgaattcgatgaaccccagcaacatgccgcccagctgctgcgcc
ccctccaaactcagccccatcagcatcctctacatcgactcaggaaacaatgtggtctac
aaacagtacgaggacatggtggtggagtcctgtggctgtaggtag
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