Lates calcarifer (barramundi perch): 108899158
Help
Entry
108899158 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and PHD finger-containing protein 3-like
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108899158
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
108899158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
FYVE_2
C1_1
Motif
Other DBs
NCBI-GeneID:
108899158
NCBI-ProteinID:
XP_018554950
LinkDB
All DBs
Position
LG8:complement(10130767..10142481)
Genome browser
AA seq
1230 aa
AA seq
DB search
MRKVRSRECETAVRRLNMGRGRGRGRGRGRGASGQLRPPSPYRLQLSPSRETLTYAQAQK
IVEVDLDGRLHRINITDPLPVITEDEMMAQDIAECNSNKENSEQTQSKSKSWRKPANSKS
RRSGKNASHQNQRSGSQQHTGATNSFQHPSHQSPLPEPNFRLLRSVSPSEAPPLPAAYYR
YIEKSGEEQDSVAEYDMDEEDLAWLEMVNQKRVSDGHASVSPDTFELLIDRLERESILES
RSQALSQSAVDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYVPEGQWLCRCC
LQSPSRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVEGVKNIPPA
RWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQKAGLFMKIDPVRETGVNGTTFSVKK
TAFCEHHSPVGFRRDGSGDESVEGRLVGGRGNRGQRSYTQSTPSPPNKKTTKGQKKKNTK
GSGGSTRRSNVPVLLVPQIPSHRLNKICTGVEVQRKNQFMQRLHNYWLLKRQSRNGMPLI
RRLHSHLQAHRTAEQKEPDEKLCAAREELRYWQKLRQDLERARLLVELIRKRERLKREQM
KIHQAALELKLTPALVLLRSTLDQLQEKDTAKIFSQPVNLSEVPDYLEFISQPMDFSTMR
TKLEGHAYCSIADLERDFDLMISNCLKYNSKDTMFHKAALQLREVGGAILRHAHRQSQSI
GLDPNTGMHLPEAPNKHGFYHCTWDDVDSLLDPENRLHLTTEEQLKALLDKLDMVTSMRT
SGGRTKRIRLLRREINTLRQKMNQQQQNTQSVNGNDKEDEGKEEEEEDEEEEEEEKEKKT
ETKNIVDNGPLTTVSNSGTDDSPPVLELTCPVSSPLPGDAPLEPPVLGIATGGRRSPGRS
YKRQRSSRSGSKSQGEDEAEVGETPSSQQEAVHEVTPLGTPPALPLAGVGRRTSVLFKKA
KNGARMAKNKSPPQQNGKTNGLESTPASPNSPGVTNITTLPPTPNASPAPPSPSAHHLRS
RGLSSESEADKPPTEAGLTNGKHTTADHDDEDQKLNCSVSPPKRSRGKPALAKVPSNENG
DISGSGKSTLLSLDSETELAPLDLVWAKCRGYPSYPAMIVDPDMPQEGLLHNGIPIPVPP
VEVLKLGEWRQTDEGKKLFLVLFFDTKRTWQWLPRNKLLPLGMDDTVDKLRLMEGKKPSV
RKSVHTAYDRAIVHLNHVRGNLNFTPSNFI
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagtgaggagtcgggaatgtgagacagctgttcgcagactcaacatgggtagg
ggtcgaggtagagggagaggaaggggcaggggggcgtctggacagttgcggcccccctcg
ccctacagactgcagctctctccatccagggagactttgacgtacgctcaggcacagaaa
atagtggaagtggacctagacgggaggctccatcggatcaacatcacggatcctctgccg
gttataaccgaggacgagatgatggcccaggacattgccgagtgcaacagcaacaaggag
aacagcgagcaaacgcagagtaaaagcaaatcgtggaggaaacccgcaaacagtaaaagc
aggaggagtggtaaaaatgcatctcaccagaaccagcggtccggctcccagcagcacaca
ggagctacgaattcctttcagcacccatcccaccaaagccccctgcctgagcccaacttc
cgtctgctgaggtcagtcagcccttcagaggcacctcctctcccggcagcgtactaccgt
tacatagaaaagtcaggggaggagcaggacagtgtggctgagtacgacatggacgaggag
gacctggcctggctggagatggtgaaccaaaagagggtgtccgacggtcatgcctctgtt
tctccagacacttttgagctgctgatcgatcgtctggagagggagtccatcctggagtcc
cgtagccaggctctgtcccagagcgcagtcgatgaggacgccttctgctgcgtctgcctg
gatgatgaatgcctcaacagcaacgtcatcctgttctgtgacatctgcaacctggctgtc
caccaggagtgttacggcgtgccctacgtacccgagggccagtggctgtgccgctgctgc
ctgcagtctccctcccgtcccgtagactgcgtgctctgtcccaaccgaggaggtgccttc
aaacagacaagtgatggacgctgggcccacgttgtctgtgccatatggatcccggaggtg
tgctttgccaacacagtgtttttggagccagttgagggggtcaagaacatccctcctgct
cgctggaagctcacctgctacctgtgcaagcagaaaggcaggggagcgtccattcagtgc
cacaaagccaactgttacagggcctttcacgtcacctgcgcccagaaggccggcctcttc
atgaagatagacccggtccgcgagacgggcgtcaacggtaccaccttctctgtgaagaag
actgctttctgtgagcatcactctcctgtggggtttcggcgggacgggtcaggagacgag
tcggtcgaagggagactggtgggcggcagagggaaccggggtcagaggtcatatactcaa
agcaccccctcaccaccgaacaagaagactaccaaaggccagaaaaagaagaacacgaaa
gggtctggtggttcgacacgtcgctcaaatgtgcctgtgctgcttgtgcctcagatcccc
tctcacaggctgaacaagatctgcacaggagtcgaagtccagagaaagaatcagttcatg
cagagacttcataactactggttactcaaacgacagtcacgaaatgggatgcctttaata
cgccgacttcattcccatctacaggcccacaggactgcagagcagaaggagcccgacgag
aagctgtgtgctgcaagagaggagcttcgatactggcagaagttgaggcaagaccttgaa
agagccagacttttggtggagctgatccgcaagagagagaggctaaagagagaacagatg
aaaattcatcaggctgctctggagttgaagttgaccccagcattggtgctgctccgatcc
accttggaccaactgcaggagaaggacacggccaaaatcttctctcagcccgtcaatctt
tcagaggtcccagattacttggagtttatttcccagcccatggacttctccaccatgcgt
accaaactggagggacacgcctactgctccatcgccgacctagagagggactttgacctc
atgatttccaactgcctcaagtacaactccaaggacaccatgtttcacaaggcggcttta
cagctgcgggaggtgggtggagccatcctccgccacgcccacaggcagtctcagagcatc
ggcctggaccccaacaccggcatgcatctgccagaggctccaaacaagcatggcttctac
cactgtacatgggacgacgtcgactctctgctggacccagagaacagactgcacttaacc
acagaggagcagctaaaggccttactggataaactggacatggttacatccatgcgaacc
agcggtggccgaaccaaacgcattaggctgctgcgccgcgagatcaacactctcagacag
aagatgaaccagcagcagcaaaacactcagtctgtgaatggtaatgacaaagaggatgaa
ggaaaagaagaagaggaagaggacgaggaggaagaagaggaggagaaggaaaagaaaacg
gagacaaaaaatattgtggataatggacctttgactacagtgtccaactctgggacagat
gactctccacctgtgctggaactgacttgcccagtgtcatcaccgctgccgggagatgct
cctctcgagcctcctgtcctgggtatcgcaactggggggcgaaggtcacccgggcgctcc
tacaagcgtcagagatcatcccgcagtgggagcaaaagccaaggtgaagatgaggctgaa
gtcggtgaaactccgtcctcacaacaggaggctgttcacgaggttacaccgctgggaacg
cccccagctctgcctttggccggagtcggtcgccggacgtcagttctgtttaagaaagct
aaaaacggagcacggatggcaaagaacaagtccccgccacaacagaatggaaaaaccaat
gggttggagagcacccctgctagtccaaattcaccaggtgtgaccaacatcaccacctta
cctcccactccaaacgcctcccccgcacctccctctccttctgcgcaccacctgaggtcc
agaggcctcagctcagaaagtgaagcagacaaaccacccacagaagcaggcctgacaaat
ggaaagcacaccactgcagaccatgatgacgaagaccaaaaattaaactgtagcgtctcc
ccacccaaacgtagtcggggtaaacctgcactggccaaagtccctagcaatgagaatgga
gacatctctgggtctggaaagtctacacttctgtccttagatagcgagacagagcttgca
ccactggacctagtctgggccaaatgcagaggatatccgtcatacccagcaatgattgtt
gacccagacatgccccaggaagggcttcttcacaacggcatccccattcctgtgcctcct
gtggaggtgcttaaactgggcgagtggagacaaacagacgaaggcaaaaagctcttctta
gttctcttctttgacaccaagagaacttggcaatggctccctcgtaacaaactactgccg
ctggggatggatgacactgtagacaaactgcgcttaatggaaggcaagaaacccagcgtt
cgcaagtctgtacacactgcgtatgaccgggccatagtacatttaaaccatgtgagagga
aatcttaacttcactccctccaattttatataa
DBGET
integrated database retrieval system
