Lates calcarifer (barramundi perch): 108899196
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Entry
108899196 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sal-like protein 3b
KO
K19871
sal-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108899196
03036 Chromosome and associated proteins [BR:
lcf03036
]
108899196
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108899196
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108899196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-Di19
zf-C2H2_2
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2HE
zf-H2C2_5
B129_C2H2-zf
UBZ_FAAP20
DUF2225
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
108899196
NCBI-ProteinID:
XP_018555018
UniProt:
A0AAJ7QFP8
LinkDB
All DBs
Position
LG3:18149016..18159869
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AA seq
1271 aa
AA seq
DB search
MSRRKQAKPQHLKSDEGATLTGLLCSNGIMEGMEREESNGGCHSSEETHICDKCCAEFFT
WTELIEHQKVCTEDPLVLIVKDNEGTSVPEESPVGPSPVPSVVSSDSSAAESTDAGFELG
ETLVNDSDSLDNLEDGREQDEAMELEHRLQDKYTSISSPQPPDSAESTSPLMSTAGSYSM
PSTNVTLEILHSTRVAVAQFSQGINSSVTGGKAASAAIPVILEHLLALQQQQVHQLQLIE
QICSQVAVMNRQPTQAALNPVSRSLSLAPNPFPSQGIIPPPILPLSGTMPSTINGQAAVS
LSSVLEKSQNIPSQTVCGKTTFRDVTCTSASSDNSTPSLSSSSSSSSSSTSTLLPPYTGS
HTSSISCTQTLSSSSPLSLGQSSLLSSSSNLPFLPQSPPSSVIFPNPLASIAATANALDP
LAALMKHRKGKLPNVSLFETKPSPEEPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFK
CNICGNRFSTKGNLKVHFQRHKEKYPHVQMNPYPVPEYLDNVPTSSGIPYGMSVPPEKPV
SSWLDSKPVVATLPATMGLPLSSTITSIGGLNDPVSVTPSVKSPYQPAPGECVSLSPNHR
SSEAHFSPVSESPQSNRETEASNILKTEGVHLPQSCTLRLRANPVTETTSSTILSVATTP
EPVTSASPVPNSPPLSLNSDETKFPSGSLQDPMQASETSKLQQLVENIDKKITDPNQCVL
CHRVLSCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLKTHIGVHRENPPVQVQHSCPI
CQKKFTNAVVLQQHIRMHMVGQIPDSTLVDGLQEMDSDISINEKNFDSLSSNGNDFIDDI
SMEDDNEEEEEEVENVEEGVSPSKALMPDCNSPSRSLAIVSSIAALENQMRMIDSNVSLH
QSFGIKPLTNGFSDSSPLNIKCALSEKRVESSSVNSPNVSESSCSPHASASPIQSNSEGM
TLKSPAVNNSRPESQESLAASVKREQSESPMSASAAAVAQERREIQAIKLCVKEETPYTM
SFQLSRDRGQSIPSLVTSTSSGIMKTEVNGHSQPNNPNEAQHPLFSVHIAPAYPPVGSPG
MTSLLGPAPPRRTPKQHNCNVCGKNFSSASALQIHERTHTGEKPFVCSICGRAFTTKGNL
KVHMGTHMWNNAPARRGRRLSVENPMALLGGEAVKFGEMFQKDLAARAMNVDPGFWNRYA
TAITNSLAMKNNEISVIQNRGISQLHPLTAGMDRVSTAGSPITSLTKAGMDLGNNRHFSM
LIDDGKEIGIN
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaagcaagccaaacctcagcacctcaagtcagacgaaggagcgacactg
accggactcctctgtagcaatggcatcatggaaggcatggagagagaggagagcaatgga
ggttgccacagcagtgaggaaacgcacatctgtgacaaatgctgtgctgagttcttcact
tggactgaactgattgaacatcagaaagtctgcactgaggatcccttggtgctgatagtt
aaggacaatgaagggacgtctgttcctgaggaatcgcctgtgggaccctctccggttcct
agtgttgtatccagtgactcatccgcagcagagtccacagacgccggcttcgagctggga
gagacgctggtgaatgacagcgacagtctggataatttagaggacggccgggagcaggat
gaagccatggagcttgagcatcgcctgcaggacaaatacacttcaatctccagccctcag
cctccagactcagctgagtccacttcccccctgatgtcaacagctggcagctacagcatg
ccaagtacaaatgtgacgctggagatccttcacagcaccagagtggctgtagcccagttc
tcccaggggatcaacagcagtgttacgggagggaaggcggcttcagcggccatcccagtg
attctggagcacctgctggctctgcagcaacaacaggtccaccagctgcaacttattgag
cagatctgtagccaggtggccgtcatgaacagacagccaacacaagctgcgttaaaccca
gtctccagatccctatctctggcacctaaccctttcccctctcaaggcatcatccctcct
cccatcctgcccctgtcaggaacgatgccctccaccattaatggacaagctgctgtttct
ttgtcatccgtgcttgaaaagtcacaaaatatcccctcacaaactgtatgtgggaagacc
acctttagagatgttacatgtacctcagcttcctcagacaattcaactccatctctctcc
agcagcagcagcagcagcagcagcagcacctccacactactgcctccttacacaggctca
cacaccagcagcattagctgtactcagacactgagctcctccagtccgctgtccctgggg
cagagcagcctcctcagctcatcctccaacctgccatttctacctcagagcccacccagc
agcgtaattttccccaatcccttggctagcatcgctgccacagctaatgcacttgaccct
cttgcagccctgatgaagcacaggaaagggaaactgcctaacgtatccttgtttgagaca
aagcccagcccagaggaaccctttttcaagcataaatgcagattctgtgccaaagtgttt
ggcagtgacagcgctctgcagatccacctgcgctcccatacaggagagaggcccttcaaa
tgcaacatctgtggcaatcgtttttccacgaaagggaacttaaaggtgcacttccagagg
cataaagaaaagtatcctcatgttcagatgaacccgtacccggtgccagaatatctagac
aatgtgccaacaagttctgggattccctatggaatgtccgtccctccagaaaaacctgtc
tcctcatggctggacagcaaacctgttgtagcaactctgccagccaccatgggtcttccg
ctttcctccactattaccagtattggaggcttgaatgaccctgtaagtgtaacaccatcc
gttaagtctccctaccagccagctcctggtgaatgtgtatctttgtcacctaaccacaga
agcagtgaggctcatttctctcctgtttcagagtctccacagtctaaccgtgagacagag
gcatccaatatactgaaaacagagggagtacacctgccccaaagctgcaccctgagactg
cgagccaacccagtaacagaaacaaccagttctacaatcctgtctgtggccaccacacct
gaacctgtcacctcggcatcccctgtccccaactctccacccctctcactcaactcggat
gagactaaattcccgtcaggtagcctccaggatcctatgcaagcgtctgaaacctcaaag
cttcagcagctggtggagaatatcgacaaaaagattacagaccccaaccagtgcgtcctc
tgtcaccgtgtccttagctgtcagagcgcgctgaagatgcactaccgcattcacaccggg
gagaggccctttaaatgcaaagtgtgtggcagggctttcaccaccaaaggtaacctgaag
acgcacattggcgttcacagggaaaatcctccggttcaggtgcaacactcgtgtcctatt
tgccagaagaagttcaccaacgctgttgttcttcagcagcacatccgcatgcacatggtc
gggcagattccggactcaacccttgtggacgggctgcaggagatggacagtgatatctct
atcaacgagaagaactttgacagtctcagcagcaatggcaatgactttattgatgacatt
tcaatggaggatgataatgaggaggaggaagaggaggtagaaaacgtggaggagggcgtg
agtccctccaaagcattgatgcctgactgtaattctccttcaaggtcccttgccattgtt
tcaagtatagcagctctggagaaccaaatgaggatgattgactctaatgtaagcctacac
cagtccttcggcataaaacccctaacaaatggttttagcgatagcagcccactcaatatt
aaatgcgctttatcggagaaaagggtggagagttccagtgtaaacagcccaaatgtgtca
gaatcctcctgttcacctcatgcatctgcatctcctattcaaagcaactcagagggcatg
acgctcaaatcacctgcagtgaataacagcaggccagaatcccaagagtctttggcagcc
tctgtgaagagagagcaatctgagtctcctatgtctgcatcagcagctgcagtggcccag
gagcggagagaaatacaagccatcaaactatgtgtgaaagaagaaactccttacactatg
tcgttccagctgagcagagacagaggtcaaagcattcccagcttggttaccagtacatca
tcaggcatcatgaaaactgaggtgaacggtcacagtcagccaaacaacccaaacgaagct
cagcacccgctgttcagcgtccacatcgctccggcttatccaccggtcggcagtccagga
atgacctccctgctcggccccgcgccccctcgacgaacgccgaagcagcacaactgcaac
gtgtgtgggaagaacttctcatcagccagcgctctgcagatccatgagcgcacacacacc
ggggagaaaccgtttgtctgctccatctgtggcagagctttcactactaaaggcaacctc
aaggttcatatgggaactcacatgtggaacaatgcaccagccaggagaggcaggcggctg
tcagtggagaaccccatggccctgctgggcggagaggccgtgaagtttggggagatgttt
cagaaggacctggcagctcgagcgatgaatgtagatcctggattttggaaccgctacgcg
acagctatcactaacagcctggccatgaagaacaacgagatctcagtgattcagaacaga
ggcatctctcagcttcaccctctgactgcaggcatggacagagtgagcaccgcaggaagt
ccaataaccagtctaactaaggcaggcatggacctgggaaataacagacatttttctatg
ctgattgatgacggcaaagaaattggaatcaattga
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integrated database retrieval system
