Lates calcarifer (barramundi perch): 108899221
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Entry
108899221 CDS
T04895
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-B
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04114
Oocyte meiosis
lcf04120
Ubiquitin mediated proteolysis
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108899221 (fbxw11a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108899221 (fbxw11a)
04340 Hedgehog signaling pathway
108899221 (fbxw11a)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108899221 (fbxw11a)
04218 Cellular senescence
108899221 (fbxw11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108899221 (fbxw11a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108899221 (fbxw11a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108899221 (fbxw11a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108899221 (fbxw11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-TrCP_D
F-box-like
ANAPC4_WD40
NBCH_WD40
WD40_like
F-box
Nup160
WD40_2
DUF6188
Motif
Other DBs
NCBI-GeneID:
108899221
NCBI-ProteinID:
XP_018555056
UniProt:
A0A4W6C138
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Position
LG8:11576002..11590861
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AA seq
527 aa
AA seq
DB search
MEPEMEDKTLELMTTSGMESQNLVDDLSPKKNTVLKLSNGPVVGSRKRPSEGNYEKEKEH
CIALFDQWSEADQVEFVERLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENI
LSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNR
TSEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIIS
GLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWEVMTGEVLNT
LIHHNEAVLHLRFANGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC
LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV
FRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaacgttggagctgatgaccacatcagggatggagtca
cagaacctcgtggacgatctgtcgccaaagaagaacacagttctcaagcttagtaatggt
cctgttgtggggtcccgcaagcgtccgtcagagggaaactatgagaaggagaaggaacac
tgcatcgctctgtttgaccagtggtcggaggccgaccaggtggagtttgtcgagcgcctg
atctcccgtatgtgccactaccagcacggccacatcaactcctacctcaaacccatgctg
cagagggacttcatcactgcgctgccagcccaaggcttggatcacatagcggagaacatc
ctgtctttcctggatgcacgctcgctgtgctcggcagagctggtgtgtaaggagtggcag
agggtcatctctgaggggatgctgtggaagaaactcatcgaacgcatggtccgcactgac
ccgctctggaaaggcttgtctgagagacatcagtgggagaaatatctgttcaagaaccgc
acgtcagaagtcccacccaactcctactatcactccctttatcccaagatcatccaagac
atagagactattgaggctaattggcgatgtggcagacacaacttgcagaggattcagtgt
cgctcagaaaatagtaaaggggtttactgtctccagtacgacgacgacaagatcatcagt
ggccttagggacaattccatcaagatctgggataagcagtctctggagtgtctgaagata
ctgaccggtcacacaggctcagtgttgtgtctgcagtatgatgagcgggtcatcgttacc
ggctcttctgactcaactgtcagggtgtgggaggtaatgacgggtgaggtactgaacaca
ctgatccaccacaacgaggcagttcttcacctgcgcttcgccaacggcctgatggtcacc
tgctccaaggaccgttcgattgcagtgtgggacatggcctcacccactgacatcagccta
cgtcgggttctggtgggacaccgggctgcagttaacgtggttgactttgacgacaaatac
attgtgtccgcctcaggggaccgcaccatcaaggtatggagcaccagcacctgtgagttt
gtgcgtactctaaatggtcataagcggggtattgcctgtctacagtacagagaccgtctg
gtggtcagtggctcgtctgacaacacaatccggttatgggacatagaatgcggggcatgt
ttgcgagtgctggaaggtcatgaggagttggtgcgctgcattcgctttgacaacaagagg
attgtcagcggcgcctacgacggtaagatcaaggtgtgggacctgcaggcagccctggac
ccacgagcccccgccagcacattatgtctgcgcactctagtggagcactctggccgcgtg
ttccgcctccagttcgatgagtttcagatcatcagcagttctcacgacgacaccattctg
atctgggacttcctgaacgtctcgaccaatggccagtcagagggacggtctccctcccgc
acctacacttacatttctagatag
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