KEGG   Lates calcarifer (barramundi perch): 108899221
Entry
108899221         CDS       T04895                                 
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-B
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04114  Oocyte meiosis
lcf04120  Ubiquitin mediated proteolysis
lcf04218  Cellular senescence
lcf04310  Wnt signaling pathway
lcf04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108899221 (fbxw11a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108899221 (fbxw11a)
   04340 Hedgehog signaling pathway
    108899221 (fbxw11a)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    108899221 (fbxw11a)
   04218 Cellular senescence
    108899221 (fbxw11a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108899221 (fbxw11a)
   03036 Chromosome and associated proteins [BR:lcf03036]
    108899221 (fbxw11a)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108899221 (fbxw11a)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     108899221 (fbxw11a)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C WD40_CDC20-Fz EIF3I DSE1_N WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like CFAP251_N Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 PAC11 NBCH_WD40 ASA1 Beta-prop_DCAF4 Beta-prop_VPS8 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_NOL10_N Beta-prop_WDR19_1st WD40_RFWD3 WD40_2 DUF6188
Other DBs
NCBI-GeneID: 108899221
NCBI-ProteinID: XP_018555056
UniProt: A0A4W6C138
LinkDB
Position
LG8:11576002..11590861
AA seq 527 aa
MEPEMEDKTLELMTTSGMESQNLVDDLSPKKNTVLKLSNGPVVGSRKRPSEGNYEKEKEH
CIALFDQWSEADQVEFVERLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENI
LSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNR
TSEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIIS
GLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWEVMTGEVLNT
LIHHNEAVLHLRFANGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC
LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV
FRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaacgttggagctgatgaccacatcagggatggagtca
cagaacctcgtggacgatctgtcgccaaagaagaacacagttctcaagcttagtaatggt
cctgttgtggggtcccgcaagcgtccgtcagagggaaactatgagaaggagaaggaacac
tgcatcgctctgtttgaccagtggtcggaggccgaccaggtggagtttgtcgagcgcctg
atctcccgtatgtgccactaccagcacggccacatcaactcctacctcaaacccatgctg
cagagggacttcatcactgcgctgccagcccaaggcttggatcacatagcggagaacatc
ctgtctttcctggatgcacgctcgctgtgctcggcagagctggtgtgtaaggagtggcag
agggtcatctctgaggggatgctgtggaagaaactcatcgaacgcatggtccgcactgac
ccgctctggaaaggcttgtctgagagacatcagtgggagaaatatctgttcaagaaccgc
acgtcagaagtcccacccaactcctactatcactccctttatcccaagatcatccaagac
atagagactattgaggctaattggcgatgtggcagacacaacttgcagaggattcagtgt
cgctcagaaaatagtaaaggggtttactgtctccagtacgacgacgacaagatcatcagt
ggccttagggacaattccatcaagatctgggataagcagtctctggagtgtctgaagata
ctgaccggtcacacaggctcagtgttgtgtctgcagtatgatgagcgggtcatcgttacc
ggctcttctgactcaactgtcagggtgtgggaggtaatgacgggtgaggtactgaacaca
ctgatccaccacaacgaggcagttcttcacctgcgcttcgccaacggcctgatggtcacc
tgctccaaggaccgttcgattgcagtgtgggacatggcctcacccactgacatcagccta
cgtcgggttctggtgggacaccgggctgcagttaacgtggttgactttgacgacaaatac
attgtgtccgcctcaggggaccgcaccatcaaggtatggagcaccagcacctgtgagttt
gtgcgtactctaaatggtcataagcggggtattgcctgtctacagtacagagaccgtctg
gtggtcagtggctcgtctgacaacacaatccggttatgggacatagaatgcggggcatgt
ttgcgagtgctggaaggtcatgaggagttggtgcgctgcattcgctttgacaacaagagg
attgtcagcggcgcctacgacggtaagatcaaggtgtgggacctgcaggcagccctggac
ccacgagcccccgccagcacattatgtctgcgcactctagtggagcactctggccgcgtg
ttccgcctccagttcgatgagtttcagatcatcagcagttctcacgacgacaccattctg
atctgggacttcctgaacgtctcgaccaatggccagtcagagggacggtctccctcccgc
acctacacttacatttctagatag

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