Lates calcarifer (barramundi perch): 108899229
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Entry
108899229 CDS
T04895
Symbol
cdx1a
Name
(RefSeq) homeobox protein CHOX-CAD
KO
K09312
homeobox protein CDX1/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108899229 (cdx1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108899229 (cdx1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108899229
NCBI-ProteinID:
XP_018555081
UniProt:
A0AAJ7VI34
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Position
LG8:10982557..10991404
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AA seq
225 aa
AA seq
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MYPSSQSARHPAQTLSMSAQYIPPPYDFTGYHHVPGVSDPSTSAWNSIYAPRDEYPYSFP
GSSPSTGQVSFTSELSGTPTAAGGGSFTPYNYISGQDPFNSRRRPHESIRPSVSGGKTRT
KDKYRVVYTDHQRLELEKEFQFNRYITMRRKTELSMALSLSERQVKIWFQNRRAKERKIN
RKKLQHSQQASTTTPTPPVHGGPADIHITTSPSSNILSDAISEEY
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccagctcacagtcggcgagacacccggctcagactctgtcaatgagcgctcag
tatatcccacctccttatgacttcaccggctatcatcacgtcccgggagtcagtgacccg
tcgacgagcgcctggaactccatttacgctccccgggatgagtacccgtacagcttcccg
gggtcaagccccagcaccgggcaggtcagcttcacctcggagctgagcggcacgcccacc
gccgctggaggggggtcgttcaccccctacaactacatctctggacaggaccctttcaac
agcaggaggagaccacatgaatccatcagaccatccgtttcaggagggaagactcgcact
aaggacaagtacagggtggtgtatactgaccaccaacgtctggagctggaaaaggagttt
cagttcaaccgctacatcaccatgaggaggaagacagagctgtcaatggcactgagcctc
tctgagagacaggtgaagatctggtttcagaacagacgtgccaaagagaggaaaatcaac
aggaagaagctgcagcattcccagcaggcctccacgactacacccaccccgcctgttcat
ggtggacccgctgacatccacatcaccaccagccccagcagcaatattttgtctgatgca
atatcagaggaatactag
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