Lates calcarifer (barramundi perch): 108899236
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Entry
108899236 CDS
T04895
Symbol
ndst1a
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1b
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108899236 (ndst1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108899236 (ndst1a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
108899236 (ndst1a)
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108899236 (ndst1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
108899236
NCBI-ProteinID:
XP_018555088
UniProt:
A0A4W6CA65
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Position
LG8:10865085..10906221
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AA seq
889 aa
AA seq
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MLGCVTRLRRLVRLLPLQTSLLLLFLFCTVSVFISAYFLYGVKRELEPSGGGVSGAEGAS
ADSDDPRVTPSRLLPLRSVSGGPGVDPGGARTDPVVLVFVESQYSQLGQEIVAILESGRF
RYRTEISPGKGDMPTLTDKERGRFTLVIYENILKYVNLDAWNRELLDKYCVEYGVGIIGF
FKANENSLLSAQLKGFPLFLHSNLGLKDCTVNPKSPLLFITRSGQPLPGPLPGDDWTVFQ
SNHSTYEPVLLAKTQSAESVASMGQNAALLPSVVQDLGLHDGIQRVLFGNNLVFWLHKLV
FVDAVAFLTGKRLSLSLERYILVDIDDIFVGKEGTRMKVPDVKALLETQRELRTHVPNFT
FNLGFSGKFFHAGSDEEDLGDDLLLSYVKEFWWFPHMWSHMQPHLFHNQSVLAEQMLLNK
KFAMEHGIPTNMGYAVAPHHSGVYPVHMQLYDAWKKVWGIKVTSTEEYPHLKPARFRRGF
IHSGISVLPRQTCGLFTHTIFYKDYPGSPNELDKLINGGELFLTVLLNPISIFMTHLSNY
GNDRLGLYTFKSLVMFVQTWTNLKMQTLPPIQLAQKYFSLFPSERDPLWQDPCEDKRHKD
IWSKEKTCDRFPKLLVIGPQKTGTTALYLFLGMHPDLTSNYPSKETFEEIQFFNGHNYHR
GIDWYMEYFPLPSNTSSDYYFEKSANYFDSEVAAQRAAALLPKAKIITILINPADRAYSW
YQHQRAHDDPVALKYSFHDVITAGHDAPVKLRVLQNRCLVPGWYAIHLERWLNYYHSSQL
LVLDGQMLKTEPASVMDKIQKFLGLANIINYHKILAFDPKKGFWCQLLEGGKTKCLGKSK
GRRYPDMDTESQGFLREYYRDHNIELSKLLYRMGQPLPSWLREELVHTR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgctgggatgcgtgacgcgcctccgtcggctggtccgtctcctccccctgcagacctcc
ctcctcctcctgttcctcttctgcaccgtcagcgtcttcatctctgcctacttcctctat
ggcgtcaagcgggagctggagccatcgggagggggcgtgtccggggccgagggcgcatcc
gcagactctgacgacccgagggtcactccgtcccggctgctacctctgcggagcgtctca
gggggccccggggtggatcccggaggggccaggacagatcctgtggttctggtgtttgtg
gaaagccagtattctcaactgggtcaggagattgtggccattttggaatccggacggttc
aggtaccggaccgagatctctcccggtaagggggacatgcccacgctgacggacaaagag
cgagggcgtttcacactggtgatttatgagaacattctcaagtatgttaacttggacgct
tggaaccgagagctgctggacaagtactgtgtggaatatggagtgggcatcattggcttc
ttcaaggccaatgaaaacagtctgctcagcgcgcagctgaaaggcttccccctttttctt
cactcaaacttgggtctgaaggactgcacggtcaaccccaagtcccccctgctcttcatc
actcgatctgggcagcccctaccaggtcctctccctggggacgactggaccgttttccag
tccaaccactccacgtacgagcccgtgctgctggccaagacccaatcagctgagagcgtt
gcgtcgatggggcagaacgccgccctgctcccgtccgtggtgcaggacctggggctccat
gacggcatccagagggtcctgttcggcaacaacttggtcttctggctgcacaagctggtg
tttgtggacgctgtggcctttctgacagggaagaggctctcgctgtcgctggagcgatac
atcctggtggatattgatgacatcttcgtgggcaaggagggaacacgcatgaaggtgcct
gatgtaaaggccctgctggagacacagagggagctgcgcacccatgtgcccaacttcacc
ttcaatctgggcttctcagggaaattctttcacgctggctctgatgaggaggacctggga
gatgacctgctgctttcctatgtgaaggagttttggtggtttcctcacatgtggagccac
atgcagccacatctattccacaaccagtctgtgctggctgagcagatgttgctcaacaag
aaatttgccatggaacacgggatccccactaacatgggctatgcggtggcgcctcaccac
tcaggcgtctaccctgtccacatgcaactgtatgacgcctggaagaaggtgtggggcatc
aaggtgaccagcacggaggagtacccacacctgaagcccgctcgcttccggcgaggtttc
atccacagcggcataagcgtgcttcccaggcagacatgcggccttttcacacacactatc
ttctacaaggactaccctggcagtccaaatgaactggacaaactcatcaatggaggagaa
ctcttcctcactgttctgctgaaccctattagtattttcatgacccacctgtccaactat
gggaacgatcgcctcggcctgtacacctttaaaagccttgtgatgttcgtccagacttgg
accaatttgaagatgcagaccctgccgcctatccagctggctcagaagtacttcagcctg
ttcccctctgagagggatcccctctggcaggatccctgtgaggacaaaaggcacaaggac
atctggtccaaagagaaaacatgtgaccgcttccccaaactgctcgtcatcgggcctcaa
aagacagggacaacagcactctacctgtttctcggcatgcaccctgacctgaccagtaac
taccccagcaaggagacctttgaggagatccagttcttcaatgggcacaactaccacaga
ggcattgactggtatatggagtacttccctctgccctccaacactagttcagactactac
tttgagaagagtgccaactactttgactctgaggtggctgcacagagggctgcagctctc
ctgcccaaagccaagatcatcaccatcctcatcaacccggcagacagagcttactcttgg
taccagcaccaaagagcccacgatgatccagtggcattgaaatactcattccatgacgtc
atcaccgcaggccatgacgctccagtcaaactacgggtcctccagaaccgctgtctggtg
ccaggctggtacgccatccacctggagcgctggctcaactactaccactccagccagctg
ctagtcttagatggacagatgctgaagacggagcctgcctcagtcatggataaaatccag
aagttcttaggcctcgccaatatcatcaactaccacaagatcctagcgtttgaccctaag
aaaggcttctggtgtcagctgctggagggagggaagacaaagtgtctgggaaagagtaaa
gggcgcaggtaccctgacatggacactgagtcccaggggttcctcagggaatactatagg
gatcacaacatcgagctgtcgaaacttctctacaggatgggtcagccgctaccaagctgg
ctcagagaagagctggtccacaccaggtag
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