Lates calcarifer (barramundi perch): 108899256
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Entry
108899256 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: lamin-A-like
KO
K12641
lamin A/C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04210
Apoptosis
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108899256
09142 Cell motility
04820 Cytoskeleton in muscle cells
108899256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108899256
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
108899256
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
BRE1
DUF4407
CCDC39
FKBP15
Emaravirus_P4
Motif
Other DBs
NCBI-GeneID:
108899256
NCBI-ProteinID:
XP_050924251
UniProt:
A0AAJ8DMI7
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Position
LG3:18066084..18072834
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AA seq
642 aa
AA seq
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MATPKNTPRGANTPLSPNRITRLQEKEDLSNLNDRLAVYIDKVRSLESENAGLRLRITES
ETEVSRELTGLKAAYETELADARQTLDSVAKERARLQLELGKLREDYKELKARNTKKESD
LPGALQRLKDLEALLNSKDASLTTALGEKRNLEVENRDLKAQVAKLDTSLGDARKQLQDE
MLRRVDGENRIQTLKEELEFQKNLHSEELREIKRRHESRMVELDNGHQQEFESKLAEALV
EMRNQHELQIKMYKDEIEKTYNAKLESARQSADRSSHLVGAAHEELQQIRMRLESTSSQL
SQLQKQLAAREAKIRDLEDALSRERDTTRRLLGEKDREMAEMRQQMQQQLDEYQELLDVK
LALDMEICAYRKLLEGEEQRLRLSPSPPPTRVTGSRSSTSAAHSRSVHCSAQSSPAKRRR
PNDTDSEASSFAGGAVARTRITQQASASGRVTVDEVDLDGKYVRLSNKADEDQNLGNWQV
KRQMGSGVPIIFKFPAKFTLKAGQRVTIWASAAGGTHNPPSDLVWKTQPSWGTGDLFQTT
LISASGEEMAMRKVTRTQFEEDDDDMVAHSTCGDSEYNLRSRTVVCGSCGLPSDKSSSCS
VSSASRSFRSGGISEGLLPHSYVFSASTPRKSGARMESCPIM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacccaaaaacactccccgaggtgcaaacactccgctgtcccccaaccgtatc
acccggctccaggagaaggaggacctgtccaacctcaacgaccgtctggccgtctacatc
gacaaggtccgctctctggagtctgagaacgccgggctgcggctgcgcatcactgagtct
gagacagaggtcagccgggagctgacaggcctgaaggccgcctacgagaccgagctggcc
gatgcccgtcagactctggactccgtggccaaagagcgagcacgtctgcagctggagctg
ggcaagctgagagaggactacaaggagctgaaagccaggaacaccaaaaaggagtcggac
ttgcctggggcgctgcagaggctcaaagatctggaggctctgctgaactcaaaggatgca
tccttgactacagctctgggagagaagcgtaacctcgaggtggaaaacagggacctgaaa
gcccaggttgccaagcttgacaccagtttgggcgacgccaggaaacagctgcaggacgag
atgctgaggagggtggatggagagaatcgcatccagactctcaaagaggagctggagttt
cagaagaacctccactctgaggaactgcgggagataaagcggcgccatgagtctcgtatg
gttgagttggacaacggccaccagcaggagtttgagagcaagctggcagaggcgctggtg
gaaatgcgaaaccagcatgaactgcagatcaaaatgtacaaggatgagattgagaagacc
tacaatgccaagctggaaagtgctcgtcagtcggcggacaggagcagccacctggtggga
gcagcacacgaggagctgcagcagatacgaatgcgcctggagtccacatcgtctcagctc
agccagctgcagaaacagttggcggctcgtgaggcgaagataagggacctggaggacgct
ctgtctcgggagcgggacaccacgcgtcgcctgctgggagagaaggacagagaaatggct
gagatgaggcaacagatgcagcagcagctggatgagtaccaggagctcctggacgtcaag
ctggctctggatatggagatatgcgcttacaggaagctgctggagggagaggagcagagg
ctgcgtctgtcccccagccctccgcccaccagagtgacaggaagtcgttcctctacctca
gcagctcactctcggtcagtccactgcagcgcccagagctctcccgccaagaggcgccgc
cccaacgacacagacagcgaggcctccagcttcgcgggaggggccgtggctcgcactcgc
atcacccagcaggcgtcagccagcggacgggtcactgtggacgaggtggacctggatggg
aaatatgtcagactcagcaacaaagcagatgaggatcagaatttagggaactggcaggtg
aagcggcagatgggatctggtgtccccatcatcttcaagttcccggctaaattcaccctg
aaggccgggcagagggtcacgatctgggcctctgctgccggcggaacccacaatcctccc
tctgacctggtgtggaagactcagccctcctggggcaccggagacctgttccagaccact
ctgatcagtgccagcggagaggaaatggcaatgaggaaagtcacccgcacacagtttgaa
gaagacgacgatgacatggtggctcacagcacttgtggggacagtgagtacaacctgcgg
agccggaccgtggtctgcggctcctgcggacttccctcagacaaatccagcagctgctcc
gtgagctcggcttcccgctccttccgcagcggcggcatctccgagggtttactgccacac
tcctacgtgttcagcgccagcacccctcgcaagtccggagccagaatggagagctgtcca
atcatgtga
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