Lates calcarifer (barramundi perch): 108899258
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Entry
108899258 CDS
T04895
Symbol
skib
Name
(RefSeq) v-ski avian sarcoma viral oncogene homolog b
KO
K26503
Ski oncogene
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108899258 (skib)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
108899258
NCBI-ProteinID:
XP_018555142
UniProt:
A0A4W6CGL3
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Position
LG8:complement(10158157..10190390)
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AA seq
694 aa
AA seq
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MEGTSFQPHPGLQQTLKQFHLSSMRSLGGPAAFSARWHQDSLFGKDGKSAEMMLTLPAQT
PPVMSGPLFIPSDRSTERCETVLEREPISCFVVGGEKRLCLPQILNSVLRDFSLQQINSV
CDDLHIYCSRCTADQLEILKVVGILPFSAPSCGLITQTDAERLCNALIYGGTYPPHCNKE
LGSLELERTEKSFKVYHECFGRCKGLFVPELYTGPSAACIQCMDCRLMFQPHKFVVHSHK
RLENRTVHWGFDSANWRAYVLLDPDYTGKEEKSHLEQLLKELKGKYDLTGKLSSKSCRSP
SPVPAKRSKFDKLQSPSADKDRKPEWLQSLSKSAHKDLKQVQLKQRPSAFRPWSPKAAEK
EKPASQNEVERSYSKNQETLVAPNLTLVPMAPPVHPRDSHAPGRGPTSISRPPQELHNGD
VQPLAKLAPSSTTNRADDMDTDGEIDVDDCDDRPVPPSSLASPPSASTSVSQTLTPQSLT
RAQEGPVWLSGPVCPEMDTLRQMLYAGLDTKEAREKLLQEIVRMRVKQEEKLAAAVQAKR
SLQQELEFVRVAKKGRLREAIEAKRNLRKEIERLRVEWERKMRDAEESCGRLKRELERER
QVRVCDKGCEAERLRVKYSTQIEELHMQLQQAEADREQLRQELQQEREARQSLESVVKDL
QIQLALQANSGPPGESKDANTDTHRQTTQLTNGS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggagggtacgagctttcagccccatcccggacttcagcaaactctgaagcagtttcat
ctgagttccatgcgctcgctcggtggaccggcggcgttttccgctcggtggcaccaggac
tcactcttcggcaaagatggaaaatccgcagagatgatgctcaccctgccggcacagacg
cccccggtgatgtccggtccactcttcatcccgtccgaccgctccacggagaggtgcgaa
acggtcctggagcgggagcccatctcctgcttcgtggtcggcggcgagaagcgactgtgc
ctgccgcagatcctcaacagcgtcctgagagatttctccctccagcagatcaactcggtg
tgcgacgacctgcacatctactgctccaggtgcacggcggaccagctggagatcctcaaa
gtggtggggatcctgcccttctcggccccgtcctgcgggctgatcactcagacggatgct
gagcgcctctgcaacgctctcatctacggcggtacatacccccctcactgcaacaaggag
ttgggctccctggagttggagcgaaccgagaagagcttcaaagtctaccacgaatgtttc
ggccggtgtaaaggcttgtttgtcccggaactgtacaccggcccgagcgccgcctgcatc
cagtgcatggactgcagactcatgttccaacctcacaagtttgtggttcacagtcacaag
agactcgagaaccggacagtccactgggggttcgactccgccaactggcgggcctatgtg
ctcttagacccggactacaccggaaaagaggagaagagtcatctggagcagctgcttaaa
gagttaaaaggaaaatatgatctgactggaaagctgtccagtaaatcttgcagatctccc
agcccggtcccagccaagaggtccaagtttgacaaattacaatctccgtcagctgacaaa
gacaggaaacccgaatggttacagtcgctgtcgaagtctgcgcacaaggatctgaaacag
gtccaactgaaacagaggccctctgccttccgcccctggtcccctaaagccgcagaaaaa
gagaaaccagcttctcagaatgaggtggagaggtcctactcaaagaatcaggagactctg
gtggctcccaatctgacactagttcctatggctcctccggtccatcccagagacagccac
gctcctggtagggggcctacatccatttccaggccgccacaggagctgcataatggagat
gtacaacctttagcaaaactggccccttccagtaccaccaacagagctgacgacatggac
acagatggagagattgatgtggacgactgcgatgatcgtccggtgcctccttcctccctg
gcctctcctccgtcagcctccaccagcgtttctcagaccctgacccctcagagtctcacc
cgagctcaggagggacctgtgtggctgtcggggcccgtttgcccagagatggacaccctg
agacagatgctctacgcaggcctggacaccaaagaagcgagggaaaagctgctgcaggag
attgtcaggatgagagttaagcaggaggagaagctggcagctgctgtgcaagctaaacgc
agccttcagcaggaattggagtttgtgagggtggctaagaaaggccgccttcgtgaggcc
atcgaagccaagcgcaacctgcgaaaggagatcgaacgccttcgtgtggaatgggagagg
aagatgagggatgcggaggagtcttgtgggcggctgaagagagagctggagagagagaga
caggtgcgggtttgcgacaaaggctgcgaggctgagcgtctccgggtcaagtactctact
cagatcgaagagttgcacatgcagctacagcaagcagaggccgatcgcgagcagctgagg
caagagcttcagcaggagagagaagctcggcagagcctggagagtgtcgtcaaagacctg
caaatccagctggcgctgcaggctaacagcggccctcctggagagtccaaggacgcaaac
acagacacacacagacagaccacacaactcaccaatggatcctaa
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