Lates calcarifer (barramundi perch): 108899263
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Entry
108899263 CDS
T04895
Symbol
ube2ka
Name
(RefSeq) ubiquitin-conjugating enzyme E2Ka (UBC1 homolog, yeast) isoform X1
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108899263 (ube2ka)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108899263 (ube2ka)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
108899263 (ube2ka)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
108899263 (ube2ka)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UQ_con
UBA
RWD
UBA_7
UEV
UBA_3
UFC1
NOMO1-like_1st
Motif
Other DBs
NCBI-GeneID:
108899263
NCBI-ProteinID:
XP_018555147
UniProt:
A0A4W6C4B5
LinkDB
All DBs
Position
LG8:11176467..11182581
Genome browser
AA seq
200 aa
AA seq
DB search
MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELKGEIAGPPDTPYEGGRYQLEI
KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA
EPDDPQDAVVANQYKQNPEMFKQTARLWSHVYAGAPVSSPEYTRKIDKLCAMGFEKNAVI
VALSSKSWDVETATELLLSN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaacattgcagttcagaggataaaacgggaattcaaggaggtcctcaaaagtgaa
gagacgagcaaaaaccagataaaagtggatctggtggatgagaacttcacagaacttaaa
ggggagatagcagggccacctgacacaccatatgaaggcggtagatatcaactagaaatt
aaaattccagagacatatccattcaatccaccaaaggtgcggtttatcacgaagatctgg
catcccaacatcagctcagtcacaggtgcaatatgtctggacattctcaaagaccagtgg
gcagcagctatgactctgaggacagtcctcttgtcgctacaagccttattggcagccgca
gagccagatgacccacaggatgcagtggtagccaatcagtacaagcagaatccagagatg
ttcaaacagacagcgaggctctggtctcatgtctatgcaggagctcctgtctccagtccg
gagtatacacgcaaaatagacaaactctgtgccatgggctttgaaaaaaatgcagtaata
gtggcattgtcgtcgaaatcctgggacgtggagacagcgacagagctactgctcagtaac
tga
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