KEGG   Lates calcarifer (barramundi perch): 108899284
Entry
108899284         CDS       T04895                                 
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
lcf  Lates calcarifer (barramundi perch)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 108899284
NCBI-ProteinID: XP_018555175
UniProt: A0A4W6DP42
LinkDB
Position
LG7_1:21633548..21639591
AA seq 660 aa
MDLRVTSLLLVLLALAEATPDRYYHVPKVSKTPYPVKSHAVAGEPGPPGAPGEPGPMGPP
GPPGKSGMGHTGPQGPPGPPGPPGFSQAGKPGTPGGPGKPGTPGIPGDRGAPGATGAMGP
RGAPGAPGTPGPAGLSSVGKPGPSGIPGAMGPRGEPGLKGHPGIPGLPGAKGERGIGVPG
VQGPSGPVGPMGPAGMPGKPGVGKPGTPGYPGEPGKAGMPGRDGAPGAMGIPGQKGHTGP
PGTGAPGKPGQNGTPGMPGPMGPKGPQGPAGQPGSPGMPGVGKTGEPGTPGSRGAPGTPG
TTGQKGEPGPTGFTGQPGAPGPIGPAGPQGARGFQGEGGPPGPKGDTGMVGAPGPRGTKG
EMGAQGFTGKPGVPGAVGPPGMPGHNGAQGPKGSQGHAGAPGLPGANGAPGLKGHTGPPG
APGKSGENGRPGPMGPGGPPGPAGPSGLKGHPGLPGPPGPAGLTAKGISGPQGPPGIPGA
RGHDGLPGPVGPPGPPGPPGAPGEMIYHHEKSMPIKSHEVVMSHEMMKAPMSAFSAVLTT
AYPPAATPIQFNQVLYNGEHHYDSHSGVFTCQIPGLYYFSYHIHVNGANALVALYKNEEP
ILFTYDEYNKGFLDQMSGSAVLMLHAGDRVYVQVPDEESNGIFAADNVHCAFSGFLIAST
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggacctgagggtaacaagccttctcctcgtcctcctagctttggctgaggcaacccct
gataggtactaccatgtgccaaaagtaagcaagactccctaccctgtcaagagtcacgcc
gttgcaggtgagccaggtcccccaggtgctccaggtgaaccaggaccaatgggaccacct
ggacctccaggaaagagtggtatgggacatactggaccacagggcccaccaggacctcct
ggaccccctggtttctctcaagcaggtaaacctggaaccccaggtggccctggaaaacca
ggtacccctggcatccctggtgacagaggtgcacctggcgcaactggagcaatgggtccc
agaggtgcacctggtgcacctggaacacctggacctgctggactttcttctgttggaaaa
cctggaccatctggcattcctggagcaatggggccaagaggagagcctggcctaaagggt
catcctggtattcctggccttcctggggccaaaggagagagaggtattggagttcctggg
gttcaaggaccatcaggtccagttggaccaatgggtccagctggtatgcctggcaagcct
ggagttggtaaacctggtacccctggctaccctggagagcctggcaaggctggcatgcca
ggaagagatggtgctcctggggcaatgggtatcccagggcaaaagggtcacactggtcct
ccaggcacaggagcaccaggaaaaccaggccagaatggtaccccaggtatgcctggacct
atgggacctaaaggtccacagggtccagctggtcagccaggctctcctggcatgccaggt
gttggcaaaaccggtgaacctggaacaccaggcagcagaggagcccctggtactccagga
accactggtcaaaaaggagaaccaggtccaactggttttacaggtcagccaggtgctcct
ggtcctataggcccagctggtccacagggtgcaagaggattccagggtgagggaggccca
ccaggacccaaaggtgacactggtatggtgggtgcaccgggcccaaggggaaccaaaggt
gaaatgggagctcagggtttcactggaaaaccaggtgtccctggggcagtaggtcctcca
ggaatgccagggcataatggtgctcagggtccaaagggttcacagggccatgctggtgcc
ccaggactcccaggtgcaaatggcgccccaggactaaaaggacacacaggtcccccagga
gcaccaggaaaaagtggtgagaatggaaggccaggacccatgggaccaggtgggccccct
ggtccagcaggtcccagcggacttaagggccatccaggtcttccaggcccacctgggcca
gctggcttaacagctaaaggcattagtggcccacagggtccacctggaattccaggtgca
agaggtcatgatggtctcccaggccctgtcggtcctcctggtccacctggcccacctggt
gcaccaggtgagatgatctatcaccatgagaagagcatgccaatcaagtcccatgaggtt
gtgatgtctcatgagatgatgaaggcccccatgtctgccttcagtgctgtgctgaccact
gcgtaccccccagctgcaactcctattcagttcaaccaggttctgtacaatggggagcac
cattatgactcccatagtggtgtgtttacttgccagatcccaggcctctactattttagc
tatcacattcatgtcaatggtgccaatgcattggtggccctctacaaaaatgaggagcca
attcttttcacctatgatgagtataacaagggcttcctggatcagatgtcaggcagtgct
gttcttatgctgcatgccggtgacagagtctatgtccaggttcctgatgaggagagtaat
ggtatatttgcagcagataatgttcattgtgctttctctgggttcttgattgcctcaacg
tga

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