Lates calcarifer (barramundi perch): 108899319
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Entry
108899319 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 292-like
KO
K26728
zinc finger protein 292
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108899319
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108899319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zn_ribbon_11
Motif
Other DBs
NCBI-GeneID:
108899319
NCBI-ProteinID:
XP_018555225
UniProt:
A0AAJ7QGH1
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All DBs
Position
LG7_1:complement(22461934..22479922)
Genome browser
AA seq
2538 aa
AA seq
DB search
MADEEADQDRSPENGISETIWELRQRLQELQEIVVRESDDSSVQSSSEYCQEFCRTLLEY
AGRWKIEEEPLPLVEVYIVALLSYAQASPYLSLQCENVPLVVERLSLSFVELLLSLKEDV
PGSLWKEFKSSVQFAHSKLQENGLTQLSLLSGLGQYDGVWTNKVLQGLLSNENLQTDQVE
EFLMQEGLVLLEMRVKQLMKEKQLGKAALLAKTCSECPVLQGKGPFKQMYLVCLCATSDQ
DQLMDELSKEDCRDALEMICNLESDGDETAAFSLCSAFLRRQLLQGDTYCAWELTLFWSK
LLKRLEPSEQAFLDRCRQMSLLSKTVYHILFLIKVIQSEIDSIGLPVCIEMCIRALRMES
DDGNTKATVCKTISCLLPNDLEVKRACQLTEFLLEPTVDSYYAVETLYNEPDQKLEEENM
PIPNSLRCELLLVFKTQWPFDPEFWDWKTLKRHCLALMGEEASIVSSIDLLNDTESPEEE
EDFFSQEGLKNIPDHLVSGTYELKDITDKRQKNREMKKLREKGFISARFRNWQAYMQYCV
LCDKEFLGHRIVRHAQTHLSGGVYSCPICAQTFTSKDTLIPHVTSHVKQSCKERLTAMKT
NKKLANPKTAAPVIAALKAKTENELYENGDSLGQNGGVIHNVQVRVERCNTESSEDNVCP
VGKCRRSFKFFKNLIAHVKAHGDNEEAKTFLEMQSKKVVCQYCRRHFVSVTHLNDHLQVH
CGVKPYICIQLNCKASFLSNTELLIHRKTHSVFKARCMFPNCGKIFNEAFKLYDHEAQHY
KTFTCKAVDCGKVFHSQQQLDVHQEEHATQEESPSSEQTSQNMHPGPSLIEQMLSNHTPL
KKESCQENWNTENPVNPDHGRLSVSIESLLKSSQVPVETLRQYKVKHDPQNMPFSTTQTQ
SLNNSVIQPVNSNLSVPNNQRDGSFDYMRPQQNQPVHQYEQNLGNMSLGCNTHVLQGQPQ
MFSSNVNIGSMSYNSDCSLPLPSQELPACSSSLLTVSSSQNSVEPAMSQPLPPTLTPQSL
SGNRPENSVTSSTTTGPPPGQRERFHCAFEMCTRHYSSYRSVTKHMKTVHPDFYEQWKVS
RTKIRITYTSAPSTSSIDISDSVTSLQNQHSNKVPVHGVQRQNVIQSPPYTNMGTGSNYS
SSAHNQNASLLMENVLNPIVLSQLGSETNPIATQSQVSDNQNWHPVPGSGQIQNCGSSQI
YPSNLQVMPQVDSSRGALPPNVPSCSMIGLTMTRSAESLQSPLTENGSLSVFPSCMEGVK
EVSQQTEELLPPYTSQMQSSLASGSKSPEKTKANQNHVQSSFPSSDIAGQNSSNNQSQNG
PLSENNPXENQKRTKRNRRTKWPAILRDGKFVCCRCFRQFNSPKSLGGHLSKRAICKPYE
ESELNTDLPTSFLDLLNSEQRVSTTQPQLSYNPAAVYQEKPHQSVTSTSTVTKDYPTDDY
PQDNLPAYGDGESNDDILKQIMAESSMSDLFVPTPAPQPLFQNPCVAYGAGERLPGSSVI
QHTENVQLKREERQEDNSYSTTHYPQPSSGTFARSEFPDPLLSQILTENPSAVPGNVPTN
HLTPGEIHSEGYHSETTIQTTDTVSNPVMQTVLPDSHISQVTTSGKQTETQRKTTEQDIK
KRLREQILAGDFQRRNSLCLSGSTDPNASSNNPMTFDPLCGASNISGLHQMSRDTKSDSV
SHGQLIQENPVIIPGTSGEIERLLNTHSFTCFRETSTPQQDVLSPTGIAVNDADLEPSQL
SASQQQWMTEIQSAFERLDLVREISDQIPASVKQNASPMNSETGPTKVQSRSSMLSTYVK
PFACENENCPFSSMSSEALWKHLSKTHNYTLEMVNVVKKRYGLYAPFKCQRCSKAFTRNS
NLRTHYQSAHKLSAKEIADLDMKRRLANATAAAAIQKWPVGANQAPVAQTTVTTHPSLEN
RARDTGTNIDITTQKFQDDSRSTVIQPLQTVPTHNQPPFATPEANGAPSLDNQSAINRQS
VVKPTIDITKKTKEKKSNGDSMSPYRPYRCVHQGCVAAFTIQHNLILHYRAVHQSALSAL
EVNKEQDQSEGLDETMEHDEEDPEAEIPQILEFRCQVKDCSRVFQEVPNLLQHYLQLHEF
SLDKVGNLLSGIKLGKFACGHQGCTASFTTLWKYIGHVKEQHKDIKLAKPEQLNGSFKCE
IEGCDRSYATKSNLLRHVMKKHHDLYQPKLKNQQIKEDGLKQSSKTLHYQMTKTSNGKEN
IESNKKIIQRGGDTKRVSKSKNNHWTKYGKPSLKSKVEASAMCTKKFPLQYPCMIKGCES
VMKSERSILKHYMGHGLSEKYLEQQRSHFIFCKKFPRQKCRSIRSDDSKSDNTSDLSDNE
LTTDTGLEGGEYGYSKPVLRKRATAGIPAALFDSKLSNDESSDGSVMLKRKRGRPRKLIE
KIVKRKKIPRTTKMDVVYSKDDESDDSCPAILQEEMTEQSAPLASFKPMGFEMSFLKFLE
QSNKSEHVLTRKVDVPETWRKTSSVNTKDTCVRFSNLRNLKSLSKVKIIIDAAFSGVTDL
MLKQLQSMQPTVVLEKND
NT seq
7617 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggaggccgaccaggaccgtagtcctgagaacggtattagtgaaacgatt
tgggaacttagacaacggttacaagagctgcaagaaattgtggttagagaaagcgacgac
tcttcggtccagtcttcttctgagtattgccaagagttttgtaggacactgctggagtat
gcaggccgttggaagatagaggaggagcctctaccactggtggaagtgtacatagttgcg
ctgctgagttacgcccaggcctctccatacctctccctgcagtgtgaaaatgttcctctt
gtggttgagaggctgtcactgagttttgtggagcttttgctctcattgaaggaggatgtt
ccaggcagcttgtggaaagaattcaagtcatctgtgcagtttgctcacagtaagctgcaa
gagaatggactcactcaactgtccctactgtctggtttgggccagtatgatggtgtttgg
accaacaaggtcctgcaaggccttctgtccaatgaaaatctacagacagaccaagttgag
gagttcctgatgcaggaggggctggtcctgttggagatgagagtgaagcagctgatgaag
gaaaagcagctggggaaggctgcactgctggcaaagacatgctctgagtgtcctgttctc
caagggaaaggacctttcaagcagatgtaccttgtctgcctctgtgctacctcagatcag
gatcagcttatggacgagctttcaaaggaggactgccgagatgcattagagatgatctgc
aatctggagtcagatggagatgaaactgcagctttcagcttatgctcagccttcctcagg
cggcagcttctccaaggagatacatactgtgcttgggagctcacactgttttggagcaaa
ctgctaaagcgattggagccatcagagcaggccttcctcgacagatgccgccagatgtcc
ttactttccaaaaccgtgtaccatatcctgttcctcatcaaggtcatccaatcagagatt
gacagcattggactaccagtgtgcattgaaatgtgcataagggctctgcgaatggaatca
gatgatggaaataccaaggccactgtgtgtaaaactatttcctgtttgcttcctaatgac
ctagaagtcaagcgagcctgccagctgactgagttcctcctggagcccacagtggattcc
tactacgctgtggagactctttacaatgaaccagatcaaaaactagaggaggagaatatg
cccattcccaactcactgcgctgcgagctcctgttggtttttaagacccagtggcctttt
gacccagagttctgggactggaaaacacttaagcgtcattgtctagcactgatgggtgaa
gaagcttcaatagtgtcatccattgacttgctgaatgatactgaaagccctgaggaagag
gaagacttcttcagtcaggaggggcttaagaatatcccagaccatttagtcagtggtacg
tatgaactaaaagacatcacagacaaaagacagaaaaacagagaaatgaagaaactgaga
gaaaaaggtttcatatctgctagattcagaaactggcaggcatatatgcagtactgtgtg
ttgtgtgacaaagagtttctcggccacaggattgtacgccatgcacagactcatcttagt
ggtggagtatacagctgccctatatgtgctcaaacctttacctcaaaagatacattgatt
ccccatgtaacgtcacatgtcaaacagtcatgcaaggaaaggctaactgcaatgaaaacc
aacaagaaattggctaatcccaaaacggctgcccctgttattgcagcgttaaaggccaag
acggaaaatgaactatatgaaaatggtgattctctagggcaaaatgggggggttatacac
aatgttcaggtcagagtggaaaggtgtaacacagagagtagtgaggataatgtatgccca
gttggaaaatgcagaaggagcttcaaatttttcaagaatctcattgcacatgttaaagct
catggggacaacgaggaagcaaagactttcctcgaaatgcagagcaaaaaggttgtttgc
cagtactgccgccgccactttgtcagtgtcacccatcttaacgatcatttgcaggtccac
tgtggtgtgaagccttacatctgtatacagttgaactgcaaggcaagtttcttgtccaac
actgagctcctcatacacaggaaaacacattctgtttttaaagctagatgcatgtttccc
aattgtggaaagattttcaatgaggccttcaaactgtatgaccatgaggcacaacattat
aaaactttcacttgtaaagctgtggattgtggaaaggtattccattcacaacagcaactg
gatgtgcaccaggaggagcatgctactcaagaggaaagcccatcttctgaacagacctca
caaaatatgcatcctggcccttcactcattgagcaaatgctttcaaatcacactcctctt
aaaaaagagagttgccaagagaactggaacactgaaaatcctgttaatccagatcatgga
agactgtcagtgtccattgagagcttgctgaaatcttcacaagtacctgtggaaacctta
agacagtacaaagtcaaacatgacccacaaaatatgcctttctcaaccactcagacacag
agtttaaataattctgtgattcagcctgtgaattccaacttgtctgttcctaataatcag
agagatggttcttttgattatatgagacctcaacagaatcaaccagtacatcaatatgaa
cagaatttaggtaacatgtcacttggctgtaatacacacgtcttacaaggccagccacaa
atgttctccagtaatgtgaatattgggtcaatgagttacaactctgactgcagtttacca
ttgcccagtcaggaactgccagcgtgtagcagcagtctgttaacagtatcatcatcccaa
aactctgtagagccagcaatgtcacaaccacttcctccaacactaacccctcagtcgctt
tctggaaacagaccagagaactctgttacatcctcaacgaccacaggtccccctccagga
cagagagagcgatttcactgtgcatttgaaatgtgtacaaggcactacagctcttacaga
agtgttactaagcacatgaaaacagttcacccagatttctatgagcaatggaaagttagt
cgaactaaaatcaggataacctacacttcagcaccaagcacatcatctattgacatttca
gattctgtcacctcacttcagaatcagcacagcaacaaagtaccagttcatggagttcaa
aggcagaatgttatccaatcacccccttatactaacatgggcacaggctctaactattct
tcatctgcgcacaaccagaatgcttcacttctgatggaaaatgttttaaatcccattgtt
ctctctcagttaggaagtgaaacaaatccaatagctacacagtcccaagtttcagataat
caaaattggcacccagtccctggaagtggacaaattcaaaattgtggctcttcccaaatc
tatccatctaacttgcaagtgatgcctcaagttgattctagcagaggtgctctacctcct
aatgtcccatcttgctccatgataggactaacgatgacaagatcagcagagtccttgcag
tcaccacttacggaaaatgggtccctgtcagttttcccctcgtgcatggagggtgtaaaa
gaagtgtcacagcaaacagaagaacttcttccgccatatacatcacagatgcagagcagt
ttagcctcaggttccaagtcaccagaaaaaacaaaggcgaatcaaaatcatgtgcagtcc
agttttccctcctcagacattgcaggccaaaatagcagtaacaaccaatctcaaaatggc
ccactctctgaaaacaacccannggaaaatcaaaaacgaaccaaaagaaacagaagaacc
aaatggcctgctattcttagggatggcaaatttgtttgttgcaggtgtttcagacagttt
aatagtcccaaatcccttggaggtcatttgtccaagcgtgcaatctgcaaaccatatgaa
gagtcggaactgaacacagacctgccaacatcatttcttgacctcctcaattcagagcaa
agagttagcaccactcagccacagttgtcttataatcctgctgctgtgtatcaggaaaag
cctcatcagtcagtaacaagtacttcaacagtcacaaaagattaccccactgacgattat
ccacaagataatttgccagcatatggggatggtgagtcaaatgatgacatccttaaacaa
atcatggccgaatccagtatgtctgatctttttgtgcccacacctgctccccagccattg
tttcaaaacccatgtgttgcctatggagccggtgagcgtttgccagggagctcagtcata
cagcatacagaaaatgtccagttgaagagagaggagaggcaagaggacaactcatatagt
acaactcattatcctcagccaagcagtggtacgtttgctagaagtgagttccctgacccg
cttctttctcaaatcctcactgaaaacccttctgctgttcctggcaatgtacctacaaac
cacttgactcctggggaaattcacagtgaagggtatcactctgagacaaccattcagaca
acagatacagtttcaaatccagtgatgcaaacggtgttacctgatagtcacattagccaa
gtgacaacaagtggcaagcagacagagacacaaaggaagactacagagcaagatattaaa
aagagactgcgggagcagattttggctggtgactttcaacgaagaaacagcttatgtctt
tcaggcagtaccgaccctaatgccagttcaaacaatcccatgacttttgacccactgtgt
ggtgcctccaatatatctggacttcatcagatgtctcgtgatacaaagagtgactcagtc
agtcatggacaactcattcaagaaaatcctgtaatcatcccaggaacctctggtgaaatt
gaacgactactgaacacacacagctttacttgtttcagggagacgtccaccccacagcag
gatgtcctgagccccacaggtattgcagtaaatgatgcagatcttgaacccagtcagtta
tctgccagccagcagcagtggatgacagaaattcaaagtgcatttgaaaggctcgacctg
gtcagagagatatctgatcagataccagcttctgtgaaacaaaatgctagtcctatgaac
agtgagacaggacccacaaaggtccagtcacgtagctcaatgttgtctacttacgtcaaa
ccgtttgcatgtgagaatgagaactgcccatttagttccatgtcaagtgaagcactttgg
aaacacctgtccaaaactcacaactacacacttgagatggtgaatgtggttaaaaaaagg
tatggcctatatgctccattcaagtgtcaaaggtgtagtaaagcattcactcgtaactca
aaccttcgcactcactaccagtcagctcacaaattatcagctaaagaaatcgcagatcta
gatatgaagcgcaggctggccaatgctactgcagctgctgctatccaaaagtggcctgtt
ggtgcaaaccaggccccagtggctcaaaccacagtgactactcatccatccttggagaac
agagcacgagatacaggaactaacattgacataactactcagaaatttcaagatgacagt
cgttccacagtcattcaacccttgcaaactgtccccacgcacaaccaacctccatttgcc
acaccagaggctaatggggctccatctctcgacaatcagtctgcaattaacaggcagtca
gtagttaagccaaccatagacattaccaagaagacaaaagagaagaagtccaacggtgat
tccatgagtccatacagaccatatcgttgtgttcatcagggctgtgtggcagcctttacc
attcagcataatctgatcctccattacagggctgtccaccagtctgctttgtcagcatta
gaggtgaacaaggagcaggaccagagtgagggattggatgaaacaatggaacatgatgag
gaggacccagaggcagagatcccccaaattttagaattcagatgccaggtcaaagactgc
tcccgagttttccaagaggttcccaaccttttgcagcactaccttcagctgcatgaattc
agtcttgataaggttggcaatctcttgtctggcatcaaactcggcaagtttgcttgtggc
caccaaggatgcacagcatccttcactactctctggaagtacattgggcatgttaaagaa
cagcataaagatataaagctggccaaacctgagcagttgaatggctcattcaagtgtgaa
attgaaggctgtgaccgttcatatgcaacaaagtcaaacctgctcagacatgtcatgaaa
aagcatcacgacctgtatcagcctaaactaaaaaatcaacagataaaagaagatgggttg
aaacaaagctcaaagactttgcattaccaaatgaccaagacaagtaatgggaaggaaaac
attgagagcaataaaaagatcatacagaggggcggtgacacaaagagagtaagcaagtca
aaaaacaatcactggacaaaatatggaaaaccctcactgaaatctaaagtggaggcatct
gcaatgtgtaccaagaaatttcctctacaatacccatgtatgatcaaaggttgtgagtca
gtcatgaaatcagagcggagcatattaaaacattacatgggacatgggctgtcagaaaag
tatctggaacagcaaaggagtcacttcatattttgcaaaaagttccccaggcagaagtgt
cgctccatcaggagtgatgattccaaatcagacaacacctctgacctttcagacaatgag
ctgaccacagacactggcctggaaggaggagaatatggatattcaaagcctgtcctacgc
aaaagggccacagcagggatccctgcggcattgtttgacagcaaattatcaaatgatgaa
agttcagatggctctgtgatgctcaaacgcaaacgaggacgtccacgaaaactgatcgaa
aaaattgtgaaacgcaagaaaataccacgcacaaccaagatggatgtagtttacagcaag
gatgatgaatcagacgactcctgccctgcaatactgcaggaggagatgacagagcagagt
gctccactggcctcctttaaacctatgggatttgagatgtctttcttaaaattcctggaa
cagtcaaataagtctgaacatgtcctcacaaggaaagttgatgtgccagaaacatggagg
aaaacatccagtgtgaacaccaaagacacttgtgtcaggttcagtaaccttcggaatttg
aaatcacttagtaaggttaaaataattatagatgctgctttttcaggtgtcactgacctt
atgttgaaacagctgcagtccatgcagcccacagtggtattggaaaaaaatgactaa
DBGET
integrated database retrieval system
