KEGG   Lates calcarifer (barramundi perch): 108899324
Entry
108899324         CDS       T04895                                 
Name
(RefSeq) probable ribonuclease ZC3H12D
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108899324
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108899324
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH UBA_N4BP1_C zf-CCCH_4
Other DBs
NCBI-GeneID: 108899324
NCBI-ProteinID: XP_018555236
UniProt: A0AAJ7QG36
LinkDB
Position
LG7_1:complement(22396813..22409149)
AA seq 605 aa
MSQNKEAERIPQTDSPEKTEERRHTGEKSASIMDHQQHAKVERFLKLGYSHSDILRVLES
LRHDAQTNDILEELIKTCHTRTYNNKSVPNSPKLVSRGCSPSPSQPRPGPDREPAAGFRP
VVIDGSNVAMSHGDKKVFSCQGLQLAVNWFWDKGLRDITVFVPLWRKEQPRPDAPITDQH
ILHELERRKILVYTPSRCVKGKRVVCYDDRYIVKLAFDSDGIIVSNDNYRDLQTENPQWK
RFIEERLLMYTFAIDKFMPPDDPLGRNGPTIDDFLRRKPWIPDNKLQHCPYGKKCTYGVK
CKFYHPERANQSQLSVADELRALRDRAKNFSPKLSLQDTHFCPTVYQPEHRYNSSTPPPL
SIEDQSHRASPSEQFIYQKDSSSLRSQANTSLHHCPSSDVDEAFSSMESSMSRLYIHDMP
YSMEHLPHSYSSGVPSYSLSHDDHSLSGSYSKNNQRPCLSGGGYYPHQNCSLSCKHPPVC
SQCRCGHQHTRMSQQPAWGSCPALPPHNGEYPGHVSEKLYFRQPSNRHTHSLPRDPWVQS
SLSDARLNGRAKSPFNEQRRALRSQLSTLFPQSVVEQVMNTYPDVSDTSELISLIQNYRT
SHISL
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagccagaataaggaggcagagaggattccccagacagacagtcctgagaagacagag
gagaggagacacacaggagagaaatcagcatccataatggaccaccagcagcatgccaaa
gtggagcgatttctcaagttaggatactcgcacagcgatatcctgagggtactggagagc
ctccgccatgatgcccagaccaatgatatcctggaggagctgattaagacctgtcacact
cgtacttacaacaacaaaagtgtccctaacagccccaagctggtgtccagaggctgcagc
cccagtcccagtcagcccagacctggaccagacagagaaccagctgctggcttcagacca
gtggttatagatggaagcaatgtggccatgagccatggcgacaagaaggtgttttcgtgc
cagggcctccagctggcagtgaactggttctgggacaaagggctgcgcgacatcactgta
ttcgttcccctgtggaggaaggaacagccacgaccggatgcgcccatcacagatcaacat
attctccatgagctggagagaaggaagatcctggtgtacacgccatctcgctgtgtgaag
ggtaagcgggtggtgtgctatgatgaccggtacattgtcaagctggccttcgattcagac
ggcattattgtgtccaacgacaactaccgcgaccttcagacggaaaatccccagtggaag
aggtttatagaagagaggctgctgatgtacaccttcgccattgacaagttcatgccccca
gatgatcctctgggtagaaatggtcccaccattgatgattttctgagaaggaagccctgg
atcccagacaacaagctgcagcactgtccatacggaaagaagtgtacttatggagtgaag
tgcaagttctaccaccctgagcgagccaaccaatcacagttgtctgtggccgatgagctg
agggcactgagagacagggccaagaacttctcacccaaactgagtttgcaggacacacac
ttctgccccactgtgtaccagccggagcacaggtacaactcatctacccctccgcccctg
agcatagaggaccagtcacacagagcttcacccagtgagcagttcatctatcaaaaagac
tccagcagcctgagaagccaagcaaacacaagcctccaccactgtccaagttcagacgtg
gacgaggccttcagctccatggaaagctccatgtccaggctctacatccacgacatgccc
tatagcatggagcaccttcctcacagctatagcagtggggtgcccagctacagcctgagc
cacgatgaccactccctctcagggtcatacagtaagaacaaccaaaggccctgtttgagt
ggaggaggttactaccctcatcaaaactgctcgctgtcctgcaaacacccccctgtgtgc
agccagtgcaggtgtggtcaccagcacaccaggatgtcccaacaaccagcatggggctcc
tgcccagcactgcctccacataacggggaatatcctggccatgtttcagaaaagctgtat
ttcaggcagccctccaacagacatacccacagcttgcccagggacccatgggtgcagagc
agcctctctgatgccaggctgaacggccgggccaagagcccattcaatgagcagaggagg
gccctgaggagccagctgagcaccctcttcccccagagtgtggtagagcaagtcatgaat
acttacccagatgtctcagacacatctgaactgatttctctcatccagaactacaggact
agccacatatccctctaa

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