Lates calcarifer (barramundi perch): 108899338
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Entry
108899338 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 1
KO
K04482
DNA repair protein RAD51
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
lcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108899338
03460 Fanconi anemia pathway
108899338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899338
04121 Ubiquitin system [BR:
lcf04121
]
108899338
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108899338
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108899338
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108899338
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108899338
RecA family proteins
108899338
FA (Fanconi anemia) pathway
Other FA pathway factors
108899338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
HHH
AAA_22
PAXNEB
AF1548-like_C
Motif
Other DBs
NCBI-GeneID:
108899338
NCBI-ProteinID:
XP_018555254
UniProt:
A0AAJ7QG14
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Position
LG7_1:complement(22902450..22909518)
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AA seq
338 aa
AA seq
DB search
MAMRSEARVEAEVEEEENYGPQPLCRLEQSGISASDIKKLEDAGFHTIEAVAYAPKKELL
NIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGS
ITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLV
GSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSAR
QGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLY
LRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaggagcgaggccagggtggaggcagaggtagaggaggaagaaaactacgga
ccacagcctttgtgcagactggagcaaagtggaatcagtgccagtgacatcaagaagctg
gaggatgcaggtttccataccattgaagcagtggcttatgcacctaagaaggagctgctc
aacatcaagggcatcagtgaggctaaagctgacaaaattctagctgaagctgccaaactg
gtgcctatgggcttcaccacagccactgagttccaccagaggagagcagaaatcatccag
atctctacaggctccaaggaactcgacaaactactacaaggtgggattgagacaggctcc
atcacagagatgtttggagaatttcggacagggaagacccagctgtgccacacactagct
gtcacctgtcagttgcccattgatcaggggggtggagaaggtaaagccatgtatattgac
acagagggtaccttcagaccagagagactcctagctgtagctgaaaggtatgggctggta
ggcagcgatgttctagacaacgtggcctacgcccgagccttcaacacagaccatcagacc
cagctgctgtatcaagcctctgctatgatggctgagtccaggtatgctcttctcatagtg
gacagtgccactgctctgtatagaacagactactcaggtagaggagagctgtcagccaga
cagggacacctgggacgtttcctgcgcatgctgctcaggctggcagatgagtttggcgtt
gccgtggtgataaccaaccaagtggtagcacaggtggacggggcagccatgttctctgca
gatcccaagaaaccaattggtggcaacattctggctcatgcctccaccacacgtctatac
ctgaggaaaggtcgtggagagacgagaatctgtaaaatctacgactcaccctgcttgcca
gaggcagaggccatgttcgccattaacgctgatggagtgggtgatgccaaggactga
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