Lates calcarifer (barramundi perch): 108899341
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Entry
108899341 CDS
T04895
Name
(RefSeq) heat shock factor protein 2
KO
K09415
heat shock transcription factor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108899341
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108899341
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
UPF0242
HEPN_Swt1
CHD5
DUF2508
Motif
Other DBs
NCBI-GeneID:
108899341
NCBI-ProteinID:
XP_018555258
UniProt:
A0A4W6DQP8
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Position
LG7_1:23151381..23169172
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AA seq
532 aa
AA seq
DB search
MKHNSNVPAFLTKLWTLVEDADTNEFICWSQEGNSFLVLDEQRFAKEILPKFFKHNNMAS
FIRQLNMYGFRKVMHIDTGIIKQERDGPVEFQHPYFKHGQDDLLENIKRKVSNTRPEDSK
IRQEDLTKILASVHSVHSKQENIDARLATLKRENETLWREISDLRQKHAHQQQLIKKLIH
FIVTLVQNNRILNLKRKRPILMNSNGKKPKYIHQIYDDKVCVEQSSVNSLNGVKGSEISD
DVIICDLTESDAEVTAEITEGSPRAYEQGDVEIVEVELDSCAVLPAETEVSTTCTDDIKQ
TGASVSAAADDSQKSSTLNSSGPTSSALQLNKPSGLSLEDPVKMMDSILNENGAISQNIN
LLGKVELMDYLDSIDCSLEDFQAMLYGKQFGIDFDTMEESVSSKESTAQLSRGRTEEDNT
DKQLIQYTSCPLLAFLDGCTPPPELDLGTGSSNSSSSSSTHLQSSSGSSVSVEAEPPSEL
LDTNLESKQLARSSLIRLEPLTEAEASEETLFYLCELSPAGLEADSTQMDRV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacaactcgaacgtcccggctttcctcacaaagctgtggacgctggtggaggat
gcggacaccaatgaattcatttgctggagtcaggagggcaacagcttcctagtattggac
gagcagcgctttgccaaggagatcctccccaagttcttcaagcacaacaacatggccagt
ttcatcaggcagcttaatatgtatggattccgcaaagtgatgcacattgatacaggcatt
atcaaacaggaaagagatggtccagtggagtttcagcacccctactttaaacatggacag
gacgacctacttgagaacatcaagaggaaggtttctaacactcggccagaggacagtaag
attcgacaggaagacctgaccaagatcttggcaagtgttcacagtgttcacagcaaacaa
gagaacatcgatgccaggctggcaacactaaagagggagaatgaaactctgtggagggag
atctcagatctgagacaaaaacatgcccaccaacaacaactcatcaaaaagctcatacat
tttatcgtcacattggtacagaacaaccgcatcctgaatttaaaacgcaaaaggccaatt
cttatgaacagcaatgggaagaagcccaaatacattcatcagatctatgatgacaaagtg
tgtgtggaacagtcatctgtcaacagtctgaatggtgtgaagggctcagagatatcagat
gacgttatcatctgcgacttgactgagagtgatgctgaggtgacagctgagatcacagaa
gggtcacccagggcctatgagcagggtgatgtagaaattgtggaagtagaactggacagt
tgtgcggtgctgccagctgagacggaggtaagcaccacctgtacagatgacatcaaacag
acaggggccagtgtgtcagcagcagcagatgacagccagaaaagcagcactttaaacagc
agtggaccaactagcagtgccctgcagctcaataaaccctcaggcctgagtctggaggac
cctgtcaagatgatggactccatactgaatgagaatggtgcaatttcacagaacatcaac
ctgctgggcaaggtggagctgatggactatctggacagtattgactgcagtctggaggac
ttccaggccatgctttatggaaaacagttcggcattgattttgataccatggaggagagt
gtgtcctccaaagagagcactgcacagctaagcagaggtagaacagaggaagacaacaca
gataagcagttgatccagtacacttcctgccccctgctggcctttcttgatggttgtacc
cctcctccagagctggatttgggtactggcagcagcaacagcagtagctcctccagcacc
cacctccagtcctcctccggctccagtgtttctgtagaggctgagccgccctcagagctg
ctggacaccaacctggagtcgaaacagctggcccgcagctccctgatccgcctggagcct
ctgacagaggcagaggccagtgaggaaacactcttctacctgtgtgaactcagtcctgct
ggactggaagcagactccactcaaatggacagagtgtga
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