Lates calcarifer (barramundi perch): 108899384
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Entry
108899384 CDS
T04895
Name
(RefSeq) F-box/LRR-repeat protein 18
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108899384
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108899384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_FBXL18
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
108899384
NCBI-ProteinID:
XP_018555307
UniProt:
A0A4W6CRY7
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Position
LG5:5865559..5870620
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AA seq
729 aa
AA seq
DB search
MSGLVRRISEDMDRQIVQEVYDEDTVSSTSVGMSDLSDEILLCILRHVPVCDLLLNVANV
CHKLQTLCHDKTLLTHVSLSEEYLADDLLVRHILKQLANHVQSLSLNGCYWLSGSTMESL
ARCRAVTHLDITGCRVTSVRLSRLLSSLSLLRSLAFDVTPGFNSAQLSSEAVGSLSRLSE
LRQTLLTPSYGVVPCCAQLRKLMLQFDIPDVTREGVGVCCQLMVGQSSVPHYQQLEEFTA
RLAPGEVNQTLLLLYLAVFSVHVPKRLRVFLVSIPGPNPAHWPAAPSLAQSLGQQGDLEA
LQLPRSWLDSVSLKRALEGNSPKHLSFSRCPALWPQVFQSLLEGGVRDATQLTSLNLSGI
NQVLYSECRNVEDHLVPGTVSRLAVGCSNIKHLNLMHTHYHHEHSPGLAGETHLCASLVK
FRRLRSLTLPACALSDGLNSHHLSTNTSPSSLFLGLKKAPRVGIQNYKPDSESALSGDST
SGLTQLLAGCPFLETLEIIGPGFVSAMPRLEPCTRASVEPRGMCAWARGVGDAHLAALEA
LPRLHRLTLAGLPGVLRGTGLVQLARQCRDLQVLSLANMGSLKTMNYTPALLDMLKQCTQ
LQELRLEQPYLNANVAFFEALSSCSRLQRLCLISRSGTFDPSATETFMERCGHVIMCHMF
MGGTLVACRTLQKALLDRFSAERSALSVVIYPLQHEDLHSVIRDIPLTLLDRITLFQSHV
AQPPHLSPL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggctagtgagaaggatttcagaggacatggatcgacaaattgtacaggaggta
tacgatgaggacacagtgtcgtctacctcagtgggaatgtcggatttgtcagatgagatt
ctgctgtgcatcctccgccatgttccagtgtgcgacctgctgctgaatgtggcgaacgtc
tgccacaagttacagacactgtgccatgataagaccctgctcacacacgtcagcctgtct
gaggagtatctggctgatgatcttttggttcggcacatactgaagcagctggccaatcac
gtgcagtctctcagcctgaacggttgctactggctgtctgggtctaccatggagtctctc
gctcgctgcagggcagtgacgcacctcgacatcactgggtgtcgcgtcacttctgtccgt
ctgtcccgtctcctctcctccctctctttactcagatcacttgcttttgatgtgacacca
ggcttcaactctgctcagctcagctcagaggcggtgggttcactgagccgcctgtcggag
ctcagacagacgctgttgacgccgagttatggtgtggtgccgtgctgcgcccaactccgc
aaactgatgctacagtttgacatcccggatgtgaccagagagggtgtcggtgtttgctgt
cagctaatggttggtcaaagcagtgtgccgcactaccagcagctggaggagttcactgcc
aggctggctccaggggaggtaaaccagaccttgctcctcctttatctggcagtattcagt
gttcatgttccgaaacgtctcagagttttccttgtctcgattcctggcccaaatcctgct
cactggcccgccgctccctcactggctcagagcttgggtcagcaaggtgacctggaggcc
ctgcagctccctcggtcctggctggattccgtgtcactaaagagagctctggagggaaac
agtccgaagcacctgagcttcagccgctgcccggcattgtggccacaggtgttccagtcg
ctgctggagggaggagtcagagatgctacacagctgaccagtctgaacctcagcgggatc
aaccaggtcctttattcagagtgtaggaatgtggaggatcacctggttccagggacagtg
agccggttggcagttggctgttccaacattaaacacctgaacctgatgcacacgcactat
catcatgaacattcacctgggctggctggggaaacacacttgtgcgccagcttggtcaaa
ttcagacgcctgcgctctctcactctgcctgcctgcgctctgtcagacggtttaaactcg
catcacctctctacaaacacgtctccctcgtcgttgttcctggggctaaagaaagctcca
cgcgtggggatccagaattacaagcctgactcagagtccgctttgtcaggggacagtacg
tcagggctcactcagctcttagccggctgcccttttttagagaccttagagatcattggt
ccaggtttcgtctctgcgatgcctcgactcgagccgtgcactcgtgccagcgtagagcct
cgtggtatgtgcgcgtgggctcgaggagttggcgatgcgcatttagccgcacttgaggct
ttgcctcgattacatcgtctgactctggctgggcttcctggggtcttgagggggacaggg
ctggtacagctggccagacagtgcagagacctacaggttttatctctggccaacatggga
tccctaaaaaccatgaactacacccctgccttgttggacatgctgaaacagtgcacgcaa
ctacaggaactcaggttagagcagccttacctgaatgccaacgtggcattctttgaggct
ctgtcctcctgctctcgtctccagcgtctctgccttatctcacgcagcggcacctttgac
ccgtcagccacagaaaccttcatggagcgatgtggtcatgtcatcatgtgccacatgttc
atgggcggcaccttggtggcttgtcgcacactgcagaaggctctgctggacagattttca
gctgagcgctcagccctgagtgtggtcatctacccactacaacatgaagacctgcactca
gtcatcagagatatcccactaacactgctggatcggataactttgttccagagccacgta
gcccagccaccacatttatcaccattgtga
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