Lates calcarifer (barramundi perch): 108899410
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Entry
108899410 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108899410
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108899410
04091 Lectins [BR:
lcf04091
]
108899410
CD molecules [BR:
lcf04090
]
Proteins
108899410
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108899410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
Ig_CD22
C2-set_2
C1-set
Ig_5
Ig_4
V-set_CD47
Ig_VEGFR-1-like_5th
HGAL
Motif
Other DBs
NCBI-GeneID:
108899410
NCBI-ProteinID:
XP_050932349
UniProt:
A0AAJ8BIF0
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All DBs
Position
LG15:6224537..6253663
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AA seq
1380 aa
AA seq
DB search
MFVLIWATLLFSGRSSSAYTGASEWGRRSCQSYYYCFTLPEGEITAEAGLCVVIPCSFTT
AYGFKPQNMVWFKCEPTKQQCDDSDMIFHSDKNIRIQPSEFRGRVSLLEPDVSQKNCSII
INDLKESDSGSYQLRVNGDWYGSADRVTYSTRATVSVKGLSQKPTVMVPPLTEGQQTTLT
CTAPGLCSGSDPKITWMWRGAGEKNSPITGNITTNQGRTSTLTFNPSAEHHGTNLTCKVR
FKWAVITKETVTLNVTYVKELRIAGNLSVKEGETLNLSCTVEDFPSPLLIMWTKCSDRNI
QNGTEINLQNNTLTDLQNSMATLSITNMTAEDSGQYTCTVKHLNKTMKENVNVTVIFVRN
PVITGDTTVKKGDVLNLTCSVQSFPLSHITWTKFGSNTNLQSDFGSATLVIPDVSAEHSG
QYICTAEYLDKNVTLYPQVTVTWFSKILNSSGCEAQSEVMTCVCMSEGFPLPTIKWPLLE
NYNVHSAVTTVSNTTVSSTVILTVKDHRNTAVECISSNESGEAKENLTTRMSEGKTEEDD
QSKKLFRIVSRVETIIAFFIGILLATIIFFMAKKCHRIKHNSPVNLDGTLEMVTNQEDPL
IYDGQAVEDDQTHGPQQAEYVAEKKTAPELNSESKDVEYANIDFSLLKRRSPMEAARKHE
STETEYAEIKKAVIEEREDDGQEEGEMLEGKEEEAMIEENEETNHGGPEEEEGEDMAVYS
NVKDIMGEIFYHSAVIFKHKFQPEINSSFPGGKQHCIQNNFCVTLTEGEISAETGLCVVL
QCSFTTAADFKVESVILFKCDPPERKCDKSDTPIFNSSNSKNVELDFRGRVSLLEPDLSH
NNCSIIINDLKTSDSGSYQLRVGGTYKGKEDGFTFESKANVTVTVLSQKPTVMVPPLTEG
QKTTLTCTAPGLCSGSDPKITWMWRGAGEKNSPITGNITASKTENLTAVTQRCSSTLSFN
PSAEHHGTEVTCKVNFTGDMTTEQTVTLNVSYVKELKISGNTAVKMGDALNLTCSVDSFP
ASDITWTISGSDKNLPEKHKTEAQKHSGSVSLIIHNMSAGDFGQYSCTAKHLNNTLTITV
DVTEKPVTTRTTTVRMGDDVSFFTKISACELQSDVLTCVCISKGFPLPTIKWPLLKNYTE
YSVITTVSNYTVNSTMMLTVKDHSNTVVECVSSIDKNETTESDVEQGDFLANLLTAVKQP
EVIIAFLIGILLSAPICCLARKCHRKKQRRSGSLSENLEMVTAEAVPLVDDGQAVEDDDR
THNQEAAEGGAEAAWQSAPDGEVEPKEVEYSNIDFSALKRKSPEETQEPTETEYAEIKKE
ATEESQDNGSEEGEVLEGNKEEEVMMGEDWETEQCTPAEEEGGEDVALYSNVNEIMSQAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttctcatctgggcgactctgcttttctctgggagaagcagcagtgcctataca
ggtgcatcagagtggggaagaagatcctgtcaaagttattattactgtttcactctgcct
gaaggagaaataacagccgaggctggactctgtgttgtgataccgtgctctttcactact
gcttatggatttaaacctcaaaatatggtttggttcaaatgtgaaccaactaaacaacaa
tgtgatgattcagacatgatattccactcagataagaacataaggattcaaccttcagag
tttagaggacgagtgtctctgctggagcctgatgtgagtcagaagaactgcagcatcatc
atcaatgacctgaaggagtcagactctggatcatatcaactcagagttaatggggactgg
tatgggagtgcagacagagttacatactctacaagagcaactgtgtccgtcaaaggtctg
agtcagaagcccacagtgatggttcctcctctgacagagggacagcagaccacactgacc
tgcactgctcctggtctctgctctggatctgatcctaaaatcacctggatgtggagagga
gcaggagagaagaactcccccatcacaggaaacatcacaaccaatcagggacgaacctca
actttgacctttaatccttcagctgaacaccacggcaccaatctcacctgtaaggtccgt
tttaaatgggccgtgattacaaaggagaccgtgactctgaatgtgacctatgtgaaggaa
cttagaatcgctgggaatttaagtgtgaaggagggtgagactctgaatctgagctgcact
gtagaagattttccatctcctttacttatcatgtggactaaatgttctgatcgaaacatt
caaaatggaacagaaattaatctacagaacaacacattaactgacctgcagaacagcatg
gccactctctccatcactaacatgacagcagaagattctggacagtacacctgcacagtc
aaacatctgaacaagaccatgaaggagaatgttaatgtaacagtgatatttgtgaggaat
cctgtgatcactggggatacaactgttaagaagggagatgtcctgaatctgacctgcagc
gttcaaagtttccctctatctcatatcacctggactaaatttggctccaacacaaacctg
cagagcgactttgggtcagccacacttgtcatccctgatgtgtcagcagaacattctggt
cagtacatctgtacagcagaatacctggacaagaatgtgactctatatcctcaagtaact
gtcacttggttttcaaagatcttaaacagctctggatgtgaggctcagtcagaggtcatg
acctgtgtatgtatgagtgaggggtttcccttacccaccatcaaatggccactgttggaa
aactacaatgtgcactcagcagttaccactgtgtcaaacaccacagtgagcagcaccgtc
atcctaactgtaaaagatcacaggaatactgcagttgagtgtatcagcagcaatgaaagc
ggggaagctaaggaaaacctcaccactcgaatgagcgagggcaagactgaagaagatgat
caatccaagaaattatttagaattgtttcacgggtggaaaccatcattgccttttttatt
ggtattcttcttgcaacaatcattttctttatggcaaaaaaatgccacagaataaaacac
aatagccctgtgaatctggatgggactctagagatggtgaccaatcaagaagatccactg
atatatgatggtcaagcagtagaagatgatcagacccatggtccacagcaggctgaatat
gtggcagagaagaaaacagcccctgaactcaacagtgagtcaaaagacgtggagtacgcc
aacattgatttctcacttttgaaaagaaggagtcccatggaggcagcaaggaagcatgaa
tccacagagacggagtacgctgaaatcaaaaaagcagtaatagaggaaagagaagacgat
ggtcaagaggaaggcgaaatgttggaaggcaaagaggaggaggccatgatagaggagaat
gaggagacaaaccatggtggcccagaagaggaggaaggggaggacatggcagtgtactcc
aatgtaaaggacataatgggtgagattttctaccacagcgctgtgatcttcaaacacaaa
tttcagcctgaaataaactcttcctttcctggaggaaaacaacactgcatacagaataat
ttctgtgtcactttgactgaaggagaaatatcagcagagactggactctgtgttgtttta
cagtgttctttcactactgctgctgattttaaagttgaaagtgtaattttgttcaaatgt
gatccacctgaacgaaaatgtgataaatctgacacaccaatatttaactccagtaacagc
aaaaatgttgagcttgactttagaggacgagtgtctctgttggagcctgacctgagtcac
aacaactgcagcattatcatcaatgacctgaagacatcagactctggatcatatcaactc
agagttggtggtacttataaagggaaggaggatggcttcacatttgagtctaaagcaaat
gttactgttacagttctgagtcagaagcccacagtgatggttcctcctctgacagaggga
cagaagaccacactgacctgcactgctcctggtctctgctctggatctgatcctaaaatc
acctggatgtggagaggagcaggagagaagaactctcccatcacaggaaacatcactgct
tccaagactgagaatttaactgctgtcacacagagatgcagttcaactctgtcctttaac
ccttcagctgaacaccacggcacagaggtcacgtgtaaggtcaacttcacaggagatatg
accacagagcagacagtgactctgaatgtgagctatgtgaaggaattgaaaatcagtgga
aatacagctgtgaagatgggtgatgctttgaatctaacctgtagtgtcgatagtttccct
gcatctgatatcacatggactatatctggctccgacaaaaatctgcctgaaaaacataaa
actgaagcacaaaaacacagtggatcagtctctctcattatccataatatgtcagcaggc
gattttggacaatacagctgtacagcaaaacatctgaacaacacactgacgataacagtt
gatgtaacagagaaacctgtgaccaccagaacaacaactgtgaggatgggtgatgatgtg
tcattttttacaaagatctctgcatgtgagcttcagtcagacgtcctgacctgtgtgtgt
atcagtaaggggtttcccttacccaccataaaatggccgctgttaaagaactacactgag
tactcagtcattaccacagtgtcaaactacacagtcaacagcaccatgatgctaactgtg
aaagatcacagcaacactgttgttgagtgtgtcagcagcattgataaaaatgaaacaaca
gagagtgacgtagaacaaggagattttcttgcaaatttgttaacagctgttaaacagcca
gaagtcatcattgcctttctgattgggatacttctttcagcacccatctgctgtttggcc
agaaaatgccacagaaaaaagcagaggagatctggaagcctgtctgagaacctggagatg
gtgacggctgaagcagttccactggtcgatgatggtcaagcagtggaagatgacgatagg
acccacaaccaagaggcagctgagggaggagctgaggctgcttggcaatcagcccctgat
ggtgaggtagaaccaaaagaggtggagtactccaacattgacttctctgcgttgaaaagg
aagagtccagaggagacacaagaacccacagagacggagtatgctgaaataaagaaagaa
gcaacagaggagagtcaagacaatggcagcgaggaaggtgaagtgttggagggcaacaaa
gaggaggaggtaatgatgggggaggattgggagacagaacagtgtacgccagcagaggag
gagggaggtgaggatgtggcactgtattctaatgtgaatgaaataatgagtcaggctgaa
tga
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