KEGG   Lates calcarifer (barramundi perch): 108899425
Entry
108899425         CDS       T04895                                 
Name
(RefSeq) RNA-binding protein MEX3A
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108899425
   04121 Ubiquitin system [BR:lcf04121]
    108899425
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108899425
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108899425
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108899425
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 zf-C3HC4 RING_XB3-XBAT31 Prok-RING_4
Other DBs
NCBI-GeneID: 108899425
NCBI-ProteinID: XP_018555366
UniProt: A0A4W6BPB8
LinkDB
Position
LG15:complement(5662721..5676209)
AA seq 627 aa
MVQREGGSFCLGEEGSCVNQTGWSNTSPSPIYRADGLVSRLPGARRETTVLRVWRIEREG
AGLWEGLAQRGELEGGGGEEEAARVLFLQSLSPVFVSHTLLLAMPSLLVLAGIMEKNGGY
GGDLAGSGFGSEGLLVPPDEEEDDSRALRVALGQLSLLGLGEGEDGGGAPTTGVQDRSNN
NNNHHNHTNSVGGGGDTAILQGKSKLCALYESSSSETKGRGCNITECVPVPSSEHVAEIV
GRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARREIISAAEHFSMLRASRN
KLGVSFSGSPPTPLPGQTTIQVRVPYRVVGLVVGPKGSTIKRIQQQTCTYIVTPSRDRDP
VFEITGSPSNAERAREEIEAHIAFRTGGLHDHNNENDCLGPNGGSSPAGSSGGLESRLQQ
VWGLQGGQRKPLTSSYRQNFSDAMVGGGGGGGGEGGGIYNKGNFSSSGEKPCSYFGSEGT
QSWGDPDYPKQVAFYAQQRSKSFGGLPLPLTRLSPGLPESCGGGSTNNSSVTSIVPVAGS
PHAQARRAHSEPTSAGEGFPGRLPVPDSPPATVRDCMTCFESKVTAALVPCGHNLFCMEC
AIRICELNHPECPVCHTQVTQAIRIFS
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggtacaacgggagggcggctcgttttgtctcggcgaggaggggagctgtgtaaaccag
actgggtggagcaacacatcgcccagccccatctatcgtgcagacggccttgtgtcccgt
ttgcctggagctcggagagagactactgtactgagagtctggcggatagagagagagggg
gccggtctatgggagggactagcgcaaaggggggaattggaaggaggagggggcgaggag
gaggcggcacgggtgctgtttctccagtctctttcccctgtctttgtctcacacactctt
ttgttagccatgcctagcctgctggttctagcagggatcatggagaaaaatgggggctac
ggcggggatctggccggctccggcttcggaagcgaaggtctccttgtgccgcccgatgag
gaggaagacgactcccgtgccctcagggtcgcgctgggccagttgtctctgctggggctc
ggggaaggcgaggacggcggcggagccccaacaacaggagtacaggaccggagtaacaat
aacaacaaccaccacaaccacacgaacagcgtcggaggtggcggggacacggcgattctg
caagggaaaagcaagttgtgcgccctgtatgagagctcctcaagtgagacgaaaggacga
ggctgcaacataacagaatgcgtcccagtgcccagctctgaacatgtggccgaaatagtg
gggagacaaggttgcaagatcaaagccctgcgggccaagaccaacacctacatcaaaacc
cctgttagaggagaggagcctgtgttcttaatcactggccggaaggaggatgttgcactg
gcccgccgtgaaatcatctctgctgcagagcacttctccatgctgcgggcatcccgcaac
aagctgggagtgtcctttagtggctccccacccacacctttgccaggtcagaccaccatt
caggtgagagtgccataccgtgttgtggggctggtagtggggcctaaaggctccaccatc
aaacgcatccagcagcagacctgtacttacatcgtcacccccagccgagaccgcgaccct
gtctttgaaatcacagggtcaccgagcaacgctgagcgtgcccgagaggagattgaagca
cacatcgccttccgaacaggaggcctgcacgaccacaataatgagaatgactgtttgggg
ccgaatggtggaagcagcccagcgggcagcagtggtggtctggagagccggctacagcag
gtgtgggggctgcaggggggccagcgcaagcctctcaccagcagctaccgccagaacttc
tcagatgccatggttggaggaggagggggaggaggaggtgaaggagggggaatctacaac
aagggcaacttttccagctccggagagaagccctgctcttattttggatcagagggaacc
cagagctggggtgaccccgactaccccaaacaggtggccttctacgcccagcagcgttcc
aagagctttggaggcctcccacttcccctgaccagactctcccctggtttacctgagtcc
tgcggaggtggaagcaccaacaactcttcagtcaccagcattgtgcccgtagccggctca
cctcatgcccaggcccgccgcgcccacagcgagccaacctcagccggcgagggtttccca
ggccgtctgccagtgccggactcgccaccggccactgtgcgggactgcatgacctgcttt
gagagcaaagtgacggctgccttggtgccctgtggccataacctcttctgcatggagtgt
gccatccgaatctgtgagctcaaccacccggagtgcccagtgtgccacacccaggtcaca
caggccatccgaatattctcttaa

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