Lates calcarifer (barramundi perch): 108899450
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Entry
108899450 CDS
T04895
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108899450
03036 Chromosome and associated proteins [BR:
lcf03036
]
108899450
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108899450
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108899450
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108899450
microRNA pathway
RISC loading complex
108899450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
108899450
NCBI-ProteinID:
XP_018555400
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All DBs
Position
LG15:complement(6661131..6695744)
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AA seq
867 aa
AA seq
DB search
MEIGTTGAVGAQSLFSMPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKKSLYTANPLPVAPTGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttggggcccagtccctgttctccatgcctcggcgg
cctggctatggcaccatgggaaagcccatcaagctgctggccaactgcttccaggtggag
atccccaagatggatgtctacctctacgaggtggacatcaagcctgacaagtgtccacgg
cgagtcaacagggaggtggttgactccatggtgcagcacttcaaggtgacaatctttggg
gatcgcaggccggtctatgatggaaagaagagcctgtatacagccaacccattgcctgtg
gcacctacaggggtggacctggatgtcactctaccgggtgagggagggaaagatcgtcct
ttcaaagtttccatcaaatttgtctctctggtcagctggcacatgctccacgaggtgctc
actggccgcagcatgcctgagcctcttgagctggacaagcccatcagcaccaacccggta
catgcagtggatgtggtcctacgacacctgccctccatgaagtacactccagtgggtcga
tccttcttctcagctccagagggctatgaccatcccttgggaggtgggagggaggtttgg
tttggcttccatcagtctgtgcggcccgccatgtggaagatgatgcttaacattgatgtg
tctgccaccgctttttacaaggcccagcctgtcatccagttcatgtgtgaagtgctggac
atccacaacatagatgagcagcctcgccctctcacagactcgcaccgggtcaaattcacc
aaagaaatcaaaggtttgaaggtggaggtgacgcactgtggaaccatgcggaggaagtac
cgtgtctgcaacgtgacccgtcggcctgccagccatcaaacgttccctttacagttggaa
aacggtcagactgtagagcgcactgtagcccagtacttcagggagaagtacaacctgcag
cttaagtacccacatttgccctgtctacaggtgggccaggagcaaaagcacacctacctg
cccctggaggtgtgtaacattgtagctggtcagcggtgcatcaagaaactgacagataac
cagacctccactatgatcaaagccacagctcgctcggcacctgacaggcaggaggagatc
agcagactggtgcgcagtgccaactacgaggcagacccatttgtgcaggaattccagttc
aaggtgcgcgacgagatggcccacgtgacggggcgagtgctacccgcccccatgctgcag
tacggcggcagggtgagcacagagcactttatgaaccgcactgtagccacgcccagccac
ggggtgtgggacatgagagggaagcagttccacactggggtggagatcaagatgtgggcc
attgcctgcttcgccacacagaggcagtgtcgagaagaaatcctgaagggtttcacagat
cagctacgtaaaatctccaaggatgctgggatgcccatccaaggccagccatgtttctgt
aaatatgcccagggagcggacagtgtggagcccatgttcagacacctgaagaacacctat
gctggactgcagctcatcatcgtcattctgccgggaaagactcccgtctacgcggaggta
aagcgcgtgggagacaccctcttgggcatggccacccagtgtgttcaggtgaagaatgtg
gtgaagacgtcacctcagaccctttccaacctctgcctcaagatcaatgtgaagctggga
ggcatcaacaacatcctggtgccgcaccaacgaccctcagtgtttcagcagccagttatt
ttcttgggagcagatgttacacatccacctgctggagatggaaagaagccctcaattgca
gcagtggtaggcagcatggatgcccatcctagcaggtactgtgccactgtgcgggtccag
aggcccaggcaggaggtgatccaggacctggcctccatggtgcgggagttgctcatccag
ttctacaagtcaacccgctacaagcccaccaggatcattttctacagggatggagtttca
gaaggccagttcagacaggtgctgtattatgagctgctggccattcgtgaggcctgtatc
agcctggagaaggagtatcagccaggcatcacctacattgttgtgcaaaaacgccaccat
acacgcctcttctgtgccgaccgtaatgaaagagttggacgtagtggaaacattcctgct
ggtactaccgtggatacggacatcacgcatccctacgagtttgacttttacctctgcagt
cacgctggaatacagggcaccagtcggccctcccactaccatgtactgtgggatgacaat
tgttttaccgctgacgagttccagctgctcacctaccagttgtgccacacttatgtgcgc
tgtacccgctcagtctccatccctgcgccagcctactacgcccacctggtagccttccgc
gcccgctaccatctggtggacaaagaacatgacagtgctgagggcagccatgtgtctggt
cagagtaatggtcgggacccacaagcgctggccaaagctgttcagattcaccacgacacc
ctgaggaccatgtacttcgcctga
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