Lates calcarifer (barramundi perch): 108899452
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Entry
108899452 CDS
T04895
Name
(RefSeq) dehydrodolichyl diphosphate synthase complex subunit DHDDS isoform X1
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108899452
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcf01006
]
108899452
Enzymes [BR:
lcf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
108899452
Prenyltransferases [BR:
lcf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108899452
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
AATase
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-GeneID:
108899452
NCBI-ProteinID:
XP_018555404
UniProt:
A0A4W6C435
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All DBs
Position
LG15:6716884..6723458
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AA seq
335 aa
AA seq
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MSWIREGELNLLEKISANVLKAGPMPKHVAFIMDGNRRFARRNNMERQEGHMQGFNKLAE
TLRWCKHLNIQEVTVYAFSIENFKRTKDEVDGLMELAKQKFERLLEERDNLKKHGVCIRV
LGDLNMLPLDLQKMIAKAVVTTRAHNKCFLNVCFAYTSRYEITNAVREMAWGVEQSLIKA
SDVSEALLSECLYSNNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNL
CEAILQYQLNYKSIQKARDLHREHQALLQLEADRACVAEHLQHHGNGKPADAQRRQEALL
HYTACREERVQDFLRALKHKRDSFFNDLCSEAVLA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggatcagggagggtgaattaaacctgctcgaaaagatttcagccaatgtccta
aaggctggtcccatgcctaaacatgtggccttcatcatggatggtaaccgtcgctttgcg
cgtaggaataacatggagcgtcaggaagggcacatgcagggcttcaacaagctggcagag
acactacgttggtgtaagcatctcaacatccaagaggtgacagtgtacgccttcagcatt
gagaacttcaaacgcactaaagatgaggtggacgggctgatggagctggccaagcagaaa
tttgaaaggctgttggaggaacgggacaatctgaagaagcatggtgtgtgtatccgggtg
ctaggtgacttaaatatgctgccccttgatcttcagaagatgattgccaaagctgtggtt
acaaccagggctcacaataaatgtttcctgaatgtgtgttttgcctacacatcaagatat
gaaatcacgaatgcagttagagaaatggcttggggagtggagcagagtttgatcaaagca
agtgatgtttcagaggcgttgctaagtgagtgcctgtacagcaataattctcccaatcct
gatctgctcatccgcacctctggagaggtgcgcctcagtgacttccttctttggcagact
tcccactcctgtctagtgtttcagtcagtcctatggccggagtactcattctggaacctg
tgtgaagccattctccagtatcagttaaattacaaatccattcagaaagccagagacctc
catagagagcaccaggccttactgcagctagaggcggatcgtgcctgtgtagcagaacac
ctgcagcaccatgggaatggaaaacctgccgacgcccagagaagacaagaggcgctgctg
cactacaccgcctgccgggaggaacgagttcaggatttcctaagagcactaaagcacaaa
agagactctttctttaatgacttatgcagcgaagccgtccttgcctag
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