Lates calcarifer (barramundi perch): 108899474
Help
Entry
108899474 CDS
T04895
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108899474 (scn1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108899474 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108899474 (scn1ba)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108899474 (scn1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_CD22
Ig_3
Ig_2
YCR043C
Motif
Other DBs
NCBI-GeneID:
108899474
NCBI-ProteinID:
XP_018555441
UniProt:
A0AAJ7QGR9
LinkDB
All DBs
Position
LG15:complement(6085767..6103259)
Genome browser
AA seq
222 aa
AA seq
DB search
MSAVQELLLLPLALLALQASLCHGACVEVDSDTEAVANEGFKLGCISCKMRGEVPATASV
NWFFKASDESEFSPLYSYEDQVGDIIDPRFYDRLHWNGSKNTKDLQDGSIFILNVTYNDK
GTYHCMFNRILTYTNYEFQTNTSKIIIMNVVPRLTRGMASILSEVMMYVSIIGLQFWLVV
EMIYCYRKISAAGEEALRESAAEYLAIASESKDNCASVQVAE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgcaagagctgctgctgttacctctggccctcctggcacttcaagcatct
ctgtgccatggagcctgtgtggaggtggactcagacacagaggccgtggccaacgaaggc
ttcaaactgggctgcatctcctgtaagatgaggggtgaggtgcccgccacggccagcgtg
aactggttcttcaaggcttcagatgagtcagagttttcccctttatacagctacgaagat
caagtaggcgacatcatcgacccacgtttctacgatcgtctgcactggaacggcagcaag
aacaccaaggacctacaggacggctccatcttcatcctcaatgtgacctacaatgacaag
ggaacctaccactgcatgttcaaccgcatcctcacgtacaccaactacgagtttcaaacc
aacactagcaagattatcatcatgaacgtggttccacgactcaccaggggaatggcatcc
atcttgtctgaggtgatgatgtatgtctccatcattgggttgcaattctggctggtggtt
gagatgatttactgctacaggaagatctctgcagcaggagaggaagctttgagagagagc
gcggcggagtatttagctatagcatcggaaagtaaagataattgtgcaagtgtacaagtg
gcagaatag
DBGET
integrated database retrieval system
