Lates calcarifer (barramundi perch): 108899526
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Entry
108899526 CDS
T04895
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108899526 (rab5ab)
04145 Phagosome
108899526 (rab5ab)
04137 Mitophagy - animal
108899526 (rab5ab)
04148 Efferocytosis
108899526 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108899526 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899526 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108899526 (rab5ab)
04031 GTP-binding proteins [BR:
lcf04031
]
108899526 (rab5ab)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108899526 (rab5ab)
Endosome - Lysosome transport
108899526 (rab5ab)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108899526 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
108899526 (rab5ab)
Exosomal proteins of colorectal cancer cells
108899526 (rab5ab)
Exosomal proteins of bladder cancer cells
108899526 (rab5ab)
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108899526 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
108899526
NCBI-ProteinID:
XP_018555528
UniProt:
A0A4W6BKT1
LinkDB
All DBs
Position
LG15:complement(4486092..4495002)
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQAAGASSGRNRGVDLTETAQPTSRPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagaggcggagctacacgacccaatgggccaaacgcaggcaacaagatttgt
cagttcaaacttgtgcttttaggagagtcagcagttgggaagtcaagtcttgtacttcgt
tttgtcaagggacagtttcacgaattccaagagagcacaatcggagctgccttcctgact
cagacagtatgtttggacgacacaacagtcaagtttgaaatctgggacacagctggtcag
gagcgctaccacagtctggctcccatgtactacagaggtgcccaggcggccatcgtggtc
tatgatataacaaatgaggagtcatttgtacgggcgaagaactgggttaaagagcttcag
agacaagccagtccaaacattgtaatagccctggctgggaacaaggccgatctcgcaaac
aagagagcactggacttccaggatgcacagtcatatgcagatgataacagcttgcttttc
atggaaacatcagcaaagacctctatgaacgtgaatgagattttcatggccattgcaaag
aagcttcccaagaacgagcctcaagctgccggagccagtagcgggcggaaccggggtgtg
gacctgacagagacggctcagcccaccagccgtccctgctgcagtaactaa
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