Lates calcarifer (barramundi perch): 108899556
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Entry
108899556 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: endothelin-1
KO
K16366
endothelin-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04270
Vascular smooth muscle contraction
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108899556
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108899556
09153 Circulatory system
04270 Vascular smooth muscle contraction
108899556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108899556
Cytokines and neuropeptides [BR:
lcf04052
]
Neuropeptides
GPCR binding
108899556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endothelin
OrsD
Motif
Other DBs
NCBI-GeneID:
108899556
NCBI-ProteinID:
XP_018555577
UniProt:
A0AAJ7QGJ8
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Position
LG3:17744869..17748397
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AA seq
210 aa
AA seq
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MDMYYFISVLSVTYSWILCTVLSAPAAETSTASTVIQGRHVRTKRCSCATFLDKECVYFC
HLDIIWVNTPERVVSYGLGNAPRTKRAVVDSMATGSGPRCQCLRENDNTCRNFCRLENHL
RYPSLDTVIRSAEGDGCAETQCKHKLAADTGRIKRMKNGKKRQVSPLALRAAVRTRLLLE
KWRVRQRHRARAWEGESSASLKTTDNLHTL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtactattttatttccgtgttatcagtgacgtactcctggattttgtgcaca
gtactatcagcgcctgctgcagagacgtccactgcctccaccgtcatccaggggcgccat
gtacggaccaaacgctgctcctgcgccactttcctggacaaggagtgcgtctacttctgc
cacttggacatcatctgggtgaacacacctgagcgcgtggtctcttatggactgggcaac
gctcccaggacgaagcgcgcggtggtggattccatggcaaccggcagcggacctcgctgc
cagtgtctccgtgaaaacgacaacacatgcagaaacttctgccgcctggaaaaccacctc
aggtatccatcgctcgacacggtgatccgctctgccgagggcgatggttgcgctgagacg
cagtgcaaacacaagttggcagccgacacgggcaggattaagaggatgaagaacggcaaa
aagaggcaggtgtcgcccctagcgctcagggctgctgtgagaacccgcctgctgctcgag
aagtggagggtgagacagcgccacagggcaagggcatgggagggcgagagctcggcctcc
ttaaagacgacagataacctccacaccttgtaa
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