Lates calcarifer (barramundi perch): 108899577
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Entry
108899577 CDS
T04895
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108899577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108899577
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108899577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
AAA_lid_PRS2_C
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
108899577
NCBI-ProteinID:
XP_018555595
UniProt:
A0A4W6BX63
LinkDB
All DBs
Position
LG15:6112947..6120077
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AA seq
417 aa
AA seq
DB search
MEDFVAVEKSPDEMPAVLSSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcgtcgctgtagaaaagagcccggacgaaatgccggcagtactgagctcc
agacctcagacaggtctatctttcctggcaccagaaccagaggatcttgaggatctttac
agccgatacaagaaactgcaacaggagctggagttcctggaggtgcaggaggagtacatt
aaagatgaacagaagaacctgaagaaagagttcctccatgcccaggaggaggtgaagagg
atacaaagcatcccactcgttattggccagttcctggaagcagttgaccagaacacagcc
attgttggctccaccacagggtccaactactatgtgcgcatcctgagcaccatagacaga
gagctgctgaagcccaatgcctcagtggccttgcacaagcacagcaatgctctggtagat
gtgctccctcctgaggctgacagcagcatcatgatgctgacgtcagaccaaaagccagat
gtgatgtatgctgacatcggtggtatggacatccagaagcaggaagtcagagaggctgtg
gagctgcctctcacacactttgagctctataaacagattggcattgaccctccccggggt
gtccttatgtacggaccaccaggttgtggtaagaccatgttggccaaggctgtggcacat
cacactacagctgcattcatccgtgtggtaggctctgagtttgttcagaagtatttgggt
gaaggccctcgtatggtgcgtgacgtcttccggctggcgaaggaaaatgcacctgccatc
attttcattgatgaaattgatgctattgccactaagcgttttgatgcacagactggagct
gacagggaggtgcagagaatcttacttgagctgcttaatcaaatggacggctttgaccag
aacgtcaatgtcaaggtgatcatggccacaaacagagcagacactttggacccggccctg
ctacgtcctggtcgtttggacagaaagattgagttccccctgcccgaccgcaggcagaaa
cgtctcattttctccactatcaccagtaaaatgaatctctctgaggaggtggacctggag
gactatgtggccagacctgacaagatctctggggctgatataaactccatttgccaggag
gctggcatgttggcagtgcgtgagaacaggtatatcgtcttggccaaagatttcgaaaaa
gcttacaagactgtcatcaaaaaggacgagcaggagcacgagttctacaagtag
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