KEGG   Lates calcarifer (barramundi perch): 108899666
Entry
108899666         CDS       T04895                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03013  Nucleocytoplasmic transport
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108899666
  09122 Translation
   03013 Nucleocytoplasmic transport
    108899666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108899666
   03041 Spliceosome [BR:lcf03041]
    108899666
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108899666
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108899666
SSDB
Motif
Pfam: THOC7 OVT1 Zw10_N Peptidase_S10 OSTMP1 Sec8_N Suppressor_APC DASH_Dad2 Terpene_synth_C V_ATPase_I COG6_N DUF1664 CENPH FUSC
Other DBs
NCBI-GeneID: 108899666
NCBI-ProteinID: XP_018555739
UniProt: A0A4W6D5W5
LinkDB
Position
LG12:16594462..16596699
AA seq 203 aa
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSPATPEEGFTQYQRMLGTLAQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQNITSAHEKIAECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDDNNQESPAENGE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggtgctgttacagatgatgaagttattcggaaacgtcttcttattgacggggacgga
gctggtgatgaccgccgaatcaatgtcctgttgaagagtttcaccaaatggtgcaactct
cctgcgaccccggaggagggctttacgcagtatcagaggatgttgggcacactggcccag
tgcgagttctccatggggaagacgttgatggtttatgacatgaatcttcgggaaatggag
aattatgagaaaatctacactaacatagaacaaaacatcacgtcagcacacgagaagata
gcagagtgcaaaaaggaaattcagagggcaaagaggatacgaaaaaatcgccaagagtac
gatgctttagctaaggttatccagcaacatcctgaccggcatgaaacactcaaacagttg
gaggcgcttgataaagaactccagcaactgtctcacatcaaggagaatgtggatgcaaag
ttggagctgaggaagaagcagttccatgtgttactcagtaccatacaggaactacagcag
acccttgagaatgacgaaaaatctgacaatgacgacaacaatcaggaaagccctgcagag
aatggcgaatga

DBGET integrated database retrieval system