Lates calcarifer (barramundi perch): 108899666
Help
Entry
108899666 CDS
T04895
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108899666
09122 Translation
03013 Nucleocytoplasmic transport
108899666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108899666
03041 Spliceosome [BR:
lcf03041
]
108899666
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108899666
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108899666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Zw10_N
Peptidase_S10
OSTMP1
Sec8_N
Suppressor_APC
DASH_Dad2
Terpene_synth_C
V_ATPase_I
COG6_N
DUF1664
CENPH
FUSC
Motif
Other DBs
NCBI-GeneID:
108899666
NCBI-ProteinID:
XP_018555739
UniProt:
A0A4W6D5W5
LinkDB
All DBs
Position
LG12:16594462..16596699
Genome browser
AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSPATPEEGFTQYQRMLGTLAQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQNITSAHEKIAECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDDNNQESPAENGE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttacagatgatgaagttattcggaaacgtcttcttattgacggggacgga
gctggtgatgaccgccgaatcaatgtcctgttgaagagtttcaccaaatggtgcaactct
cctgcgaccccggaggagggctttacgcagtatcagaggatgttgggcacactggcccag
tgcgagttctccatggggaagacgttgatggtttatgacatgaatcttcgggaaatggag
aattatgagaaaatctacactaacatagaacaaaacatcacgtcagcacacgagaagata
gcagagtgcaaaaaggaaattcagagggcaaagaggatacgaaaaaatcgccaagagtac
gatgctttagctaaggttatccagcaacatcctgaccggcatgaaacactcaaacagttg
gaggcgcttgataaagaactccagcaactgtctcacatcaaggagaatgtggatgcaaag
ttggagctgaggaagaagcagttccatgtgttactcagtaccatacaggaactacagcag
acccttgagaatgacgaaaaatctgacaatgacgacaacaatcaggaaagccctgcagag
aatggcgaatga
DBGET
integrated database retrieval system