Lates calcarifer (barramundi perch): 108899686
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Entry
108899686 CDS
T04895
Name
(RefSeq) WD repeat-containing protein 1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108899686
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108899686
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
eIF2A
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_WDR11_1st
WD40_RFWD3
WD40_like
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_DCAF12
Beta-prop_ELP1_1st
DUF5711
WD_LRWD1
HPS3_N
Motif
Other DBs
NCBI-GeneID:
108899686
NCBI-ProteinID:
XP_050930193
UniProt:
A0A4W6D422
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All DBs
Position
LG12:complement(16826930..16837423)
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AA seq
653 aa
AA seq
DB search
MGKARLSEGCIRFRVCVIGECTAGGASLSPLFHSFGRVTLSKRPAGKMPHELKHVFASLP
QMERGVSKVIGGDPKGNNFLYTNGKCVIIRNIENPAIADIYTEHAHQVTVAKYAPSGFYI
ASGDASGKIRIWDTTQKEHLLKYEYTPISGKIKDIAWTEDSKRIAVVGDGREKFGAVFLW
DSGSSVGEVSGHSKLINSVDIRQKRPYRLATASDDTCGSFFEGPPFKFKFTLRDHSQFVN
CVRFSPDGSRFVTAGADGQIFIYDGTNGERVCSLGGEKAHKGGIYAVSWSPDSSQLISAS
GDKTVKLWDVGAGTAVTTFNMGTDVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPDRPI
RTVKGHSKSIQCLTVHKNEGRSYIYSGSHDGHINYWDAETGENDCFSGKGHSNQVSKMVV
DEANELVTCSMDDTLRYTNINKKEYSASDLVKMDFQPKSVSAATGGLSLAVCIGQIVLLK
DKKKVFTLDNLDYEAEVGVIHPGGTTAAVGGTDGKIRLYAIQGTTLKDEGKTIEAKGPIT
DMAYSNDGAYLAAIDEKKVATVYSVADGHSVKQEFYGHHAKPVTLAWSPDNEHFATGGMD
MMVYIWTVADADQRIKLPDSHRLHHVSGLAWIDEHTLVTASHDASIKQWTITY
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagccaggctgagcgagggctgcattcgcttccgtgtttgtgtgatcggggag
tgcacagccgggggagcttcactgtctccactgtttcattcatttggaagagtaacgtta
agcaagagaccagcagggaaaatgccgcatgaactgaaacatgtgttcgccagtctccca
cagatggagaggggagtttcaaaagtgattggtggtgatcccaaaggcaacaacttcctg
tataccaatggaaagtgtgtcatcatcaggaacattgaaaaccccgctatcgcagacatt
tacactgaacatgcccatcaagttactgttgccaagtatgcccccagtggattctacatt
gcatctggagatgcatccggaaagatccgtatctgggacaccacccagaaggagcacctg
ctcaagtatgagtacactcctatttcaggcaagatcaaggacatcgcatggacagaggac
agcaagaggattgctgttgttggggacggacgagagaagtttggggcagtgttcctgtgg
gactctggatcctcagtgggggaagtttctggccactccaaattaatcaacagtgtagac
ataaggcagaaacgcccttaccgccttgccactgccagcgatgacacctgcggttccttc
ttcgaggggcctcccttcaaattcaagttcacattgcgtgaccacagccagtttgtcaac
tgtgtccgtttctctccggatggaagtcggtttgtcacagctggtgctgacggccagatt
ttcatctatgatggaacaaatggtgagcgtgtttgctctctgggtggagagaaggcccac
aaaggaggaatctacgcagtcagctggagtcctgacagctcccaactgatttctgcctca
ggggacaagaccgtgaagctctgggatgttggtgcaggtacggctgtcaccacgttcaac
atgggcactgatgtgctcgaccagcagctgggctgcctgtggcagaaagaccacctcctc
agcatctccttgtcaggatacatcaactacctggacaagaacaaccctgaccggcccata
cgcaccgtcaagggtcacagcaaatccatccagtgtctgacagttcacaaaaatgaaggc
cgatcatacatctactcggggagtcatgatggacacatcaattactgggatgcggaaact
ggggagaacgactgcttctccgggaagggccacagcaaccaggtgagcaagatggtggtt
gatgaagccaacgagctggtgacatgcagcatggatgatacactgcgctacaccaacatc
aacaagaaggagtacagtgcttctgatctggtgaagatggatttccagcccaaaagtgtg
tcagcagcaacaggagggctgtcactggctgtttgcattgggcagattgtcttgctgaag
gataagaagaaagtcttcacattggacaatctcgactatgaagcagaggtgggagtcatc
caccctggtggcaccactgctgccgtggggggaacagatgggaaaatccgtttgtacgcc
attcagggcaccactctgaaggacgagggtaaaacaatcgaggctaaagggccaatcaca
gacatggcctactccaatgatggagcctatctggctgcaattgacgaaaagaaagttgcc
acagtctatagtgtggcagacggccactcggtcaaacaggagttttatggacaccatgcc
aagccagtgaccttggcctggtcacctgataatgagcactttgcaactggtgggatggac
atgatggtgtacatctggacggttgctgatgcagaccagaggatcaagctcccagactct
caccggttgcaccatgttagcggtctggcctggatagatgaacacactctagtcactgcc
tcccacgatgccagcatcaagcagtggactattacatactga
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