KEGG   Lates calcarifer (barramundi perch): 108899686
Entry
108899686         CDS       T04895                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcf04990]
    108899686
Domain-containing proteins not elsewhere classified [BR:lcf04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   108899686
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C eIF2A Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_HPS5 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_WDR11_1st WD40_RFWD3 WD40_like Beta-prop_DCAF4 Beta-prop_WDR19_2nd Beta-prop_DCAF12 Beta-prop_ELP1_1st DUF5711 WD_LRWD1 HPS3_N
Other DBs
NCBI-GeneID: 108899686
NCBI-ProteinID: XP_050930193
UniProt: A0A4W6D422
LinkDB
Position
LG12:complement(16826930..16837423)
AA seq 653 aa
MGKARLSEGCIRFRVCVIGECTAGGASLSPLFHSFGRVTLSKRPAGKMPHELKHVFASLP
QMERGVSKVIGGDPKGNNFLYTNGKCVIIRNIENPAIADIYTEHAHQVTVAKYAPSGFYI
ASGDASGKIRIWDTTQKEHLLKYEYTPISGKIKDIAWTEDSKRIAVVGDGREKFGAVFLW
DSGSSVGEVSGHSKLINSVDIRQKRPYRLATASDDTCGSFFEGPPFKFKFTLRDHSQFVN
CVRFSPDGSRFVTAGADGQIFIYDGTNGERVCSLGGEKAHKGGIYAVSWSPDSSQLISAS
GDKTVKLWDVGAGTAVTTFNMGTDVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPDRPI
RTVKGHSKSIQCLTVHKNEGRSYIYSGSHDGHINYWDAETGENDCFSGKGHSNQVSKMVV
DEANELVTCSMDDTLRYTNINKKEYSASDLVKMDFQPKSVSAATGGLSLAVCIGQIVLLK
DKKKVFTLDNLDYEAEVGVIHPGGTTAAVGGTDGKIRLYAIQGTTLKDEGKTIEAKGPIT
DMAYSNDGAYLAAIDEKKVATVYSVADGHSVKQEFYGHHAKPVTLAWSPDNEHFATGGMD
MMVYIWTVADADQRIKLPDSHRLHHVSGLAWIDEHTLVTASHDASIKQWTITY
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgggcaaagccaggctgagcgagggctgcattcgcttccgtgtttgtgtgatcggggag
tgcacagccgggggagcttcactgtctccactgtttcattcatttggaagagtaacgtta
agcaagagaccagcagggaaaatgccgcatgaactgaaacatgtgttcgccagtctccca
cagatggagaggggagtttcaaaagtgattggtggtgatcccaaaggcaacaacttcctg
tataccaatggaaagtgtgtcatcatcaggaacattgaaaaccccgctatcgcagacatt
tacactgaacatgcccatcaagttactgttgccaagtatgcccccagtggattctacatt
gcatctggagatgcatccggaaagatccgtatctgggacaccacccagaaggagcacctg
ctcaagtatgagtacactcctatttcaggcaagatcaaggacatcgcatggacagaggac
agcaagaggattgctgttgttggggacggacgagagaagtttggggcagtgttcctgtgg
gactctggatcctcagtgggggaagtttctggccactccaaattaatcaacagtgtagac
ataaggcagaaacgcccttaccgccttgccactgccagcgatgacacctgcggttccttc
ttcgaggggcctcccttcaaattcaagttcacattgcgtgaccacagccagtttgtcaac
tgtgtccgtttctctccggatggaagtcggtttgtcacagctggtgctgacggccagatt
ttcatctatgatggaacaaatggtgagcgtgtttgctctctgggtggagagaaggcccac
aaaggaggaatctacgcagtcagctggagtcctgacagctcccaactgatttctgcctca
ggggacaagaccgtgaagctctgggatgttggtgcaggtacggctgtcaccacgttcaac
atgggcactgatgtgctcgaccagcagctgggctgcctgtggcagaaagaccacctcctc
agcatctccttgtcaggatacatcaactacctggacaagaacaaccctgaccggcccata
cgcaccgtcaagggtcacagcaaatccatccagtgtctgacagttcacaaaaatgaaggc
cgatcatacatctactcggggagtcatgatggacacatcaattactgggatgcggaaact
ggggagaacgactgcttctccgggaagggccacagcaaccaggtgagcaagatggtggtt
gatgaagccaacgagctggtgacatgcagcatggatgatacactgcgctacaccaacatc
aacaagaaggagtacagtgcttctgatctggtgaagatggatttccagcccaaaagtgtg
tcagcagcaacaggagggctgtcactggctgtttgcattgggcagattgtcttgctgaag
gataagaagaaagtcttcacattggacaatctcgactatgaagcagaggtgggagtcatc
caccctggtggcaccactgctgccgtggggggaacagatgggaaaatccgtttgtacgcc
attcagggcaccactctgaaggacgagggtaaaacaatcgaggctaaagggccaatcaca
gacatggcctactccaatgatggagcctatctggctgcaattgacgaaaagaaagttgcc
acagtctatagtgtggcagacggccactcggtcaaacaggagttttatggacaccatgcc
aagccagtgaccttggcctggtcacctgataatgagcactttgcaactggtgggatggac
atgatggtgtacatctggacggttgctgatgcagaccagaggatcaagctcccagactct
caccggttgcaccatgttagcggtctggcctggatagatgaacacactctagtcactgcc
tcccacgatgccagcatcaagcagtggactattacatactga

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