Lates calcarifer (barramundi perch): 108899735
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Entry
108899735 CDS
T04895
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108899735
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108899735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108899735
04090 CD molecules [BR:
lcf04090
]
108899735
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Tumor necrosis fators
108899735
CD molecules [BR:
lcf04090
]
Proteins
108899735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
108899735
NCBI-ProteinID:
XP_018555873
UniProt:
A0A4W6BY94
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Position
LG1:complement(15633685..15636831)
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AA seq
264 aa
AA seq
DB search
MGPAMAVLAGVKPGNGQRTGEGRLSWPVFLLTLAAVTSSSLSALSLYQLMGLRAEVERFK
LEVCRRREEGQEVKHGGQTENISSRGSSQEPIRQPETQNAFGLTRRRRMVATTETPVSQP
FLQLLANNSRKTFRKDFDLEPYTGIPWQTGLRRGNALGAEGDSITVREEGFFFVYSQVYY
MDSTFAMGHVVIRRKRNVVGDEPQCVVLFRCIQSMNPIYPFNTCYTGGIVKLEVGDQLEL
LIPRSTANVSLDGDSTFLGAFKLV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggccctgcaatggcagttttggcaggtgtgaagcctgggaacggacaacggacaggt
gaagggaggctgtcctggccagttttcctgctgacactagctgctgtcacctcctcctct
ctttcagctttgtccctgtaccaactgatgggtctccgagctgaggtagagagattcaaa
ttagaggtctgtcgcaggagagaagagggacaagaggtcaagcatggaggccagactgag
aatatcagtagcaggggaagcagccaagagcccatccgccaacccgaaactcaaaatgct
tttggccttacaaggaggaggagaatggtggctacaacagagacaccagtttcgcagcct
ttcctgcagctgttggcaaacaacagcagaaaaaccttcaggaaagactttgacttggag
ccttacacaggtatcccctggcagactggactgagaaggggcaatgccttgggggctgag
ggagacagcatcacagtcagagaggagggcttcttctttgtgtacagtcaggtctattac
atggacagcacctttgcaatgggtcacgtggtgattcggaggaagaggaacgtggtagga
gatgagcctcagtgtgtagtcctgttccgctgcatccagagcatgaaccccatctaccct
ttcaacacctgctacacaggaggtattgtgaagctggaggttggggaccagctggagctt
ctgatcccccgctccacagccaacgtgtctctggatggagactccaccttcctgggtgct
ttcaaactggtttaa
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