Lates calcarifer (barramundi perch): 108899742
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Entry
108899742 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108899742
G protein-coupled receptors [BR:
lcf04030
]
Others
Chemoreception
Vomeronasal pheromone
108899742
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
108899742
NCBI-ProteinID:
XP_018555881
UniProt:
A0AAJ7QHD0
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Position
LG21:14517818..14522209
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AA seq
864 aa
AA seq
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MLYSCFFPAVSSPLYSSSCQLQGQFHLNGIHKDGDVVIGGVFGVHFFSTHPDLSFTAEPQ
QTICIGFDVSGFRKVQTMAFAIDEINRNSNLLPNVTLGYSLYDNCNQLGVAFRAALSLVN
GQEEQIILHKNCVGTPPVLGIVGDSSSTRSIAISTVLGLYRVSMVSYFATCSCLSDRQKF
PSFFRTIPSDAFQVRAIIQILKHFGWTWTGLLVCDDDYGLHAARIFQSDLGPSAGGCLAY
LEVLPWGDNPAELKKIVDVMKKSTARVVIVFAYQSHMINLMEQVVRQNVTGLQWIASEAW
TTFAVLQTPRLMPYLGGTLGIAIRRGEIPGLRDFLLQIGPDLHHNNSYENRMVNQFWEHT
FQCRFAPPPAGWVEAGGALCTGQEDLESVETEFLDVSNLRPEYNVYKAVYALAYALDNML
QCEPGRGPFSGNSCGNLQRLEPWQLVYYLEKVNFTTSFGDQVSFDENGDVLPIYDIMNWQ
WLPDGRTEVQTVGEVKKSAFKGEELTLDEDRIFWNFESKKPPRSVCSESCPPGTHMVRKK
GKPECCFDCIPCSEGMISNKTDSMECTSCPEDFWSSPQRDHCVPKITEYLSYHEPLGIFL
TATSLLGTFICAVVLGIFIYHRRTPVVRANNSELSFQLLLSLKLCFLCSLLFIGRPRLWT
CQLRHAAFGISFVLCVSCILVKTMVVLAVFKASKPGGEASLKWFGVLQQRGTVLVLTSVQ
AAICTAWLVSSSPTPHKNTEYHNDKIVYECVVGSTVSFAILLGYIGLLAILSFLLAFLAR
NLPDSFNEAKLMTFSMLIFCAVWVAFVPAYISSPGKYADAVEVFAILASSFGLLVALFGP
KCYIILLRPERNTKKAIMGRVTEL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgttgtattcctgcttttttcctgctgtatcctcccctctttattcctcctcctgccag
ttacagggacagtttcacctaaatgggatacacaaggatggagatgtggttataggtggg
gtgtttggagtccacttcttttctactcatcctgacctgtcttttactgctgagccacag
cagactatctgcattggttttgatgtttcaggattcagaaaagtacagaccatggccttt
gctattgatgagatcaacagaaactccaacctgctacctaatgtgactctgggatacagt
ctgtatgataactgcaaccagctaggagttgcgttccgtgcagcattgtcgttagtcaat
ggtcaagaagagcaaattatattacacaagaactgtgtaggaacccctccagtcctgggg
attgtgggtgattcttcttctacacgttctattgccatctccactgttttaggtttgtac
cgagtgtccatggtgagttattttgccacatgttcctgcctgagtgaccggcaaaagttt
ccatccttcttcaggacgatcccaagtgatgctttccaggtgcgtgctatcattcagatt
ctgaaacactttggctggacttggacaggtctgctggtctgtgatgacgattatggactc
catgctgcccgaatcttccaatctgacctgggtccatctgctggaggttgtctggcctac
ttagaggttttgccctggggtgacaacccagctgaactaaaaaagattgtggatgtgatg
aagaaatccacagctcgtgtggtcattgtgtttgcatatcagagtcacatgattaatctc
atggaacaggtggtgaggcagaatgtgacaggactgcagtggatagccagtgaagcctgg
acaacatttgctgtactccagaccccccgcctcatgccgtacctgggtggaacactgggc
attgccatccgtcgaggagaaataccagggctcagagacttcctgttacaaataggtcct
gacctacaccacaacaacagctatgaaaatagaatggtaaatcagttttgggaacacaca
tttcagtgtagatttgcaccacctccagcaggttgggtggaagctgggggagcattatgc
actggacaggaagatctagagagtgtggagactgagttcttggatgtttcaaacctcagg
ccagaatataatgtgtacaaggctgtgtatgctctggcatatgcccttgataacatgctg
cagtgtgagccagggagagggcctttcagtgggaacagctgtggaaatttacaaagactg
gagccatggcagcttgtgtattacttggaaaaggtcaacttcaccacatcatttggtgat
caagtgtcatttgatgagaatggtgatgtcttaccaatctatgatatcatgaactggcag
tggcttcctgatggaagaactgaagttcagactgtgggtgaggttaagaagtcagccttc
aaaggtgaagaactcacacttgatgaagacagaatcttctggaactttgaatccaaaaag
ccaccacggtcagtgtgcagtgagagctgtcctccaggtacccacatggtcagaaagaag
gggaaacctgagtgttgttttgactgcatcccttgttctgagggaatgatcagcaataag
actgactccatggagtgcaccagttgtccagaggatttctggtccagtccgcagcgtgac
cactgtgttcctaaaataacagagtacctctcctatcatgagcctctgggtatcttcttg
acagccacctcactgctgggcacatttatctgtgctgttgtcctaggcatcttcatctat
catcgcagaacacctgtagttcgtgccaacaattctgaactcagtttccagctattgctg
tcacttaagttatgtttcctctgctcattgctgttcattggacgacccagactttggaca
tgccaactgagacatgcagcatttgggatcagctttgtgctttgtgtctcatgtatcttg
gtgaaaaccatggtggttctggctgtgttcaaagcctccaagccaggaggtgaagccagt
ctgaagtggtttggtgtcttacagcagagagggacagttctggttcttacttctgttcaa
gcagcaatctgcactgcttggcttgtctcttcatcaccaactcctcataaaaacactgaa
taccacaatgataagatagtttatgagtgtgtagttgggtccacagttagttttgcaatc
ctacttggttatattggtttattggctatcctcagtttcctgttagcatttctggcaagg
aatcttccagacagttttaatgaggccaaactcatgactttcagcatgttgatcttctgt
gctgtgtgggtggcatttgtccctgcttatatcagctcaccaggcaaatatgcagatgca
gtggaggtatttgccatcctggcctccagctttggcctcttggtggcactgtttggaccc
aagtgttacataatcctgctgagaccagagagaaacacaaagaaagctatcatgggccgg
gtcactgaattataa
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