Lates calcarifer (barramundi perch): 108899782
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Entry
108899782 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: CD166 antigen homolog A-like
KO
K06547
activated leukocyte cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108899782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108899782
04090 CD molecules [BR:
lcf04090
]
108899782
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Other
108899782
CD molecules [BR:
lcf04090
]
Proteins
108899782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
Ig_PDGFR_d4
C1-set
Syndecan
DUF6377
TMEM154
Ig_4
Protocadherin
DUF6773
PTHB1_GAE
Motif
Other DBs
NCBI-GeneID:
108899782
NCBI-ProteinID:
XP_018555944
UniProt:
A0AAJ7QH61
LinkDB
All DBs
Position
LG21:complement(14812483..14850711)
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AA seq
569 aa
AA seq
DB search
MHLLSASCVCALLITALLHRVSGLETVIGLYGETLEIPCNNGAIKAEDVMLTKWKYDKGD
GLSGDLLVRQRDNNISILATDEYKGRVSLAANASLLLSAAKLSDQRTFTCMVVAGADIRE
YPVNVVIYKTPTNLEISDKVEELEIGKLTKLGTCVAQDANPAANITWLRNNKPLAADGKG
ISIQASVLVDPDTGLSTTTSVLEYSAEKEDTGAQFTCSTQHTVGTELVSSPVTFTITYST
ENIVLQVIAQEPLVEGDNVTLKCVADGNPAPTSFNFHLKGELVKVENTDTYTITNVSRDT
SGEYKCSLIDDPSLEASEDITVNYLDINLNPSGNIVRSAGAALDPTLRIDASGESKVFWT
KDNVKLDKQPKFTNLTYADSGLYESKVMMGLLSRKASFELLVEGAPVIRQLLKKRGEDGQ
HKVLICEAEGSPKPAVSWSINGTSSDESPFINGKITHKITVEPTANLTVSCTVSNEFGTD
TKAINVSSLIVEVRMDKQDQSEDSDQTKLVVGVVVGLLIATMIIGLAYWVYMKKSKQGSW
KTGEKENGSSEEEKKLEEKVEENSQKAEV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgttgtccgccagctgcgtgtgcgccctcctcatcaccgcgctcctccaccga
gtcagcggtttggagactgttatcggcctgtatggagaaacactcgagatcccgtgcaac
aatggagccataaaagcagaagatgtgatgctcactaaatggaaatatgacaaaggagat
ggactttcaggagacctgctggtcaggcagcgagacaacaacatctccatcctcgccacc
gatgaatacaagggccgggtgagcctggccgccaacgccagcctgctgctctccgcggcc
aagctgtccgaccagcggacgttcacctgcatggtggtggctggcgcggacatccgggaa
tacccggttaacgtggtgatttacaagacgccaacgaacctggagatttctgacaaagtg
gaggaactagagattggcaaacttactaagctaggaacatgtgttgcgcaagatgccaat
ccagccgcaaacatcacgtggttgaggaacaataaacctctggcagctgatgggaaaggg
atttccatccaggcctcggtgctggtagaccccgatactggcctctcgaccaccacctcc
gtgctggagtactcggccgagaaggaagacacgggcgcccagttcacctgcagcactcag
cacaccgtgggcacagagctggtgtcctctccggtgaccttcactatcacctactccaca
gagaacatcgtccttcaggtcattgctcaggagcctctagtagaaggagataatgtgact
ctgaagtgtgttgcagatggtaacccagctcctaccagctttaacttccaccttaaggga
gagttggtgaaagtggaaaacacagatacatacaccatcaccaatgtctcacgtgacacc
agcggtgaatacaaatgctctctcattgacgacccctcgctggaagcatctgaggacatc
acagtcaactacctagacatcaatttaaacccctctgggaatatcgtcaggagtgctggt
gcggccctggatccgactctgcggattgatgcttctggagaatcaaaggtcttttggaca
aaggataatgttaaactggacaagcagcccaagtttaccaacctgacttacgcggactct
ggcctctatgagagcaaggtgatgatggggctcctcagccgaaaagcttcttttgagctg
ctcgttgaaggtgccccagtcatcagacagctgctcaaaaagcgcggcgaagatggccag
cataaagtcttgatttgtgaagctgaaggttccccgaagccagctgtttcctggagcatc
aacggcacctcgtctgatgagagtcccttcatcaatggaaagattacacacaagatcacg
gttgagcccactgcaaatctaactgtctcttgtacagtgagcaatgagtttggcacggac
accaaagctataaatgtgtcatccttaattgtggaggtgagaatggataaacaagaccaa
tcggaggatagcgaccaaaccaagttggtggttggagttgtagtcggtctcctcatcgcc
actatgattataggcctggcatactgggtctacatgaagaaatccaagcaaggcagctgg
aagaccggtgaaaaggagaacgggtcttctgaggaggagaaaaaactggaggagaaagtg
gaggagaacagccaaaaagctgaggtgtaa
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