Lates calcarifer (barramundi perch): 108899819
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Entry
108899819 CDS
T04895
Symbol
celsr1a
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
lcf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108899819 (celsr1a)
09133 Signaling molecules and interaction
04519 Cadherin signaling
108899819 (celsr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108899819 (celsr1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108899819 (celsr1a)
04515 Cell adhesion molecules [BR:
lcf04515
]
108899819 (celsr1a)
Peptidases and inhibitors [BR:
lcf01002
]
Mixed peptidases
Family P2
108899819 (celsr1a)
G protein-coupled receptors [BR:
lcf04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
108899819 (celsr1a)
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Major cadherins
108899819 (celsr1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Cadherin_FAT4_N
Ig_CLSTN
Laminin_G_1
EGF
Ig_Cad99C_N
EGF_laminin
EGF_TEN
Fibulin_C
Dicty_CAR
hEGF
K319L-like_PKD
Frizzled
Motif
Other DBs
NCBI-GeneID:
108899819
NCBI-ProteinID:
XP_018556001
LinkDB
All DBs
Position
LG18:complement(3966251..4051282)
Genome browser
AA seq
3086 aa
AA seq
DB search
MGFCRFTSMESPMYWIWVCVLFNVPLAGCLEMHLSETLQPGTLLANLSLGPGWTYKIDRT
LSPKFTQSFLQVDRHDGVIRLSHKVQCAHTPRRNPASVYFRAGSSTSGDVILTQFNVFVH
GQDCFIKYKRKKASGKPDIHIKHLSKLEATSCLPPGKLLLNVTERLPAFTRSIAFLDTEC
VGKDLSALFRHGDLFLASDLCLGHRQPEVNLHCALHSSPGGRLSVQLSLTLIKVSKQHGS
VSEPVQKMPGKLIRRGKRQVNASPQFQLPNYQVSVPENEPAGTRVITLKATDPDDGEAGR
LEYSMEALFDSRSNDFFTIDSQTGSITTVQALDREVKDTHVFKVTVTDNGTPKRSATSYL
TVTVSDTNDHSPVFEQTEYRVSIRENVEVGFEVMTIRATDGDAPSNANMIYKIVNADGVN
SVFEIDPRNGLVRIRERPDRETQAQYQLIVEANDQGKDPGPRSATATVHISVEDENDNYP
QFSKKRYVVQVPENVAVNTKVIQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVID
VINPLDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDMNDNAPMFVSTPFQATVLEN
VAIGYSVIHIQAIDGDSGENARLEYRLTDTTPGFPFTINNSTGWITVCEELDRETTDFYT
FGVEARDHGIPVMSSSASVSITVLDVNDNVPTFTEKVYSLKINEDAVVGTSVLTVTAVDR
DVNSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRYDTAQ
VFINVTDANTHRPVFQSANYQVMLSEEKPVGSTVVVISATDEDTGENARITYVMEDNVPQ
FKIDPDTGAITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNVPQFLR
DMYQGTVFEDAPVYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTAR
KLDRENVPVYNLKAFAVDKGVPPLKAAVNIHVVVQDINDNAPVFEKDELYIDVEENSPVG
SVVARITAADPDEGTNAQIMYQIVEGNIPEVFQLDIFNGDLTALTDLDYETKTEYVIVVQ
ATSAPLVSRATVHIRLIDMNDNQPVLQDFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVS
DKLRYKFESGNELSLLLLNEDTGDLRLSRDLDNDRPLEAPMTISVTDGLHRVVALCTLRV
TIITDDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTKREAVFVFNIQNDTDVQG
SILNVTFSAMQPGGGPGKGTFFPSEELQEQIYLNRTLLRLISSQEVLPFDDNICLREPCE
NYMKCVSVLKFDSSPPFIASDTVLFRPIHPINGLRCRCPVGFTGDYCETEIDLCYSGPCK
NNGRCRSREGGYTCECLEDFTGEHCELNASSGRCVPGVCKNGGKCVNRLAGGFMCQCPPG
EYEKPYCEMTTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIA
LEIIDEQIQLTFSGGETKTTVSPYILGGVSDGQWHSVQLHYYNKPNIGRLGIPHGPSGEK
VAVVAVDDCDISMAIRFGKQIGNYSCAAQGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVR
NRDFVGCMRNLSIDSKPIDMASYIANNGTTEGCPAKKNFCANDVCQNGGVCVSKWNTYSC
DCPTGYGGKNCEQVMPSPQFFDGQALVSWSDPDITVAVPWYIGLMFRTRQPAGTLMQANV
GPSSTINLMVSEQQVRMEVLLRQQLVAALSFPQVRVNDGEWHHLLVELRSIKDGKDIKYM
ATVSLDYSMYQKSVEIGNDLPGLKLQTLHVGGLPGEGNHVKKGFVGCIQGVRMGETSTNV
ANVNMAQGLKIRVHDGCDLDDPCDSNICPDNSHCSDDWSTHTCICDPGYFGKECVDACQL
NPCEHVSTCVRKPSSSHGYTCECGQNYYGQYCEYKVEKPCPQGWWGSPVCGPCNCDTNRG
FHKDCNKTTGECRCKDNHYRPEGEDTCYPCECFSVGSESRTCDPVTGQCPCKGGVIGRQC
NRCDNPFAEVTPTGCEVVYEGCPKAFDAGIWWPKTKFGRPAAMNCPKGSIGTAIRHCSDE
KGWLLPELFNCTTVTFSHLKKLNEDLRRNSSRMDSERSKTIVRLLHSATNNTPHYYGNDV
KTAAQLLNYVLQYESRQAGFDLTAMRDAEFNENLVRAGSAILDPDNKEYWEQIQKTEGGT
AHLLRNFEDYANTLAQNVRKTYLKPFTIVTDNMILTVDYLDVSDPDKVTFPRFQDIQEYY
PRELGSSIHFPQFNLHTQGHRAEPTAAPSTQTNPPQEEEHTVSDRRRRHLEPAAPLPVAV
VIVYKSLGKLLPERYDPDRRSLRLPNRPVINTAIVSATVHTEGPPLPPILDPPITLEYTL
LETEERTKPVCVFWNHSIAIGGTGGWSSKGCEVLNRNNSHISCQCNHLTSFAVLMDISKR
EHGDVLPLKIVTYTTVAVSLILLLITFILLCLLHRLRSNLHAIHRNLVAALFFSELVFLL
GINQTDNPFVCTVIAILLHYFYMCTFAWMFVEGLHIYRMLTELRNINHGHMRFYYAMGWG
IPAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWSFAGPIFVVVLVNIVIFILAAKASCGR
RQKAVEKSGAIPALRMAFLLLLLISATWLLGLMAVNSDVMTFHYLFAVFSCLQGVFIFFF
HVVFNKEVRKNLKNVFTGKKSVPDESSTTRASLLTRSLNCNNTYTEDGPLYRSGIGESTV
SLDSTLRSAKSRSSYLAYTLREESGQKPSVSSGTAKGHTDLDGPLFHRNGTKGDDSDSDS
ELSVDEHSSSYASSHSSDSEDDDIDVKPKWNNERQPIHSTPKADSVPNHMKPYWPAEATT
ASDSEDPGGAERLRVETKVNVELHPENKLNHIGEREREMPQERDKQTPSNAKDGLPPSQP
NSNSNHQPEQRKGILKNKISYPPPLTDKNMKNRLREKLSDYNPPTITSPPPNNNNTTSSP
LPSSVNIMAPSSRPPSLASNDGGRPGNHDTSSLIKPPVAPRPQVPTGPPPAGIYRETNGG
VAMHLKSGTVNGGNESDSDGSNETSI
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgtaggtttacaagcatggagtcaccgatgtactggatttgggtctgtgtc
ctgttcaacgtgccgcttgcgggatgtttggagatgcacctttcggagactttacagccc
gggacccttctggcgaacctgtcgctcggacctgggtggacttataaaattgacaggact
ttatcccctaaattcacccagagctttctccaagttgataggcacgatggagttatccgg
ctgtcccacaaagttcagtgcgcgcacacaccgaggaggaacccggcgtctgtttatttc
agagcaggttcctcaacatctggggacgttattctgacacagtttaatgtgtttgtccac
ggccaggactgttttattaaatacaagagaaagaaagcgtcaggtaagccagacattcac
attaaacacctttcaaaactggaggcaacttcctgcttacccccaggtaaattgctgttg
aatgtaacagaacgtttgcctgccttcacgcgcagcatcgcttttttggacactgaatgt
gttggaaaagacttgagtgcactgttcaggcacggcgatttgttcctagccagtgacttg
tgtcttgggcacaggcagcctgaagtaaacttgcactgcgcgttgcacagctctccaggc
ggccgactctctgtgcagctgagtttgacgcttataaaagtgtccaaacaacatggatcc
gtatcagaacccgtccagaaaatgcctggcaaattgatccgcagggggaagagacaggtg
aacgcgtctccccagttccagctccccaactatcaggtgtccgtgcccgagaatgagcct
gcggggacgcgcgttatcaccctgaaagccactgacccggatgatggagaggcagggagg
ctggagtatagcatggaagccttgtttgacagtaggtccaatgactttttcaccattgat
tctcaaacagggagcataacaaccgtccaggcattagacagagaagtcaaagacacccat
gttttcaaagtcactgtgactgacaatggcaccccaaaaagatctgccacttcttacctc
actgtcactgtgagtgacactaatgatcatagcccggtgtttgagcaaactgaataccgt
gtcagcatccgggagaatgtagaagtgggctttgaagtgatgacaatccgggccactgat
ggggacgctccctccaatgccaacatgatttataagattgtgaacgccgatggagtcaac
tcagtgtttgaaatcgacccccggaatggcctggtgaggatcagggagcggcctgacagg
gagacccaggcccagtaccagctgattgtcgaggccaatgaccagggcaaagacccgggt
ccccgcagtgccactgccactgtccacatctcggtggaggatgagaacgacaactaccca
cagttcagtaaaaagaggtatgttgtacaggtcccagagaatgtggctgtcaacaccaaa
gtcatccaggtggaggctacagacaaagatgaggggaacaatgccaaagtccattacagc
atcatcagtgggaatgtgaaaggacagttctacattcactcccccactggtgtgattgat
gtcatcaatcctctggactatgagatgattcgggagtacaatttgcgtattaaggctcaa
gacgggggcaggcctccactgataaatggcacagggatggtggtggtgcaagtggtggac
atgaatgacaatgcccctatgtttgtcagcacacctttccaggctactgtgttggaaaac
gtggccattggttactctgtgatccacattcaagccattgacggtgattcaggagagaac
gctcgcttggaatatcggctcactgacaccacacctggttttccattcaccatcaataac
agcacaggctggattactgtgtgtgaggagcttgacagagagaccactgacttctacaca
tttggcgtggaggcaagagatcatggaatacctgtgatgtcctcctccgccagtgtcagc
atcacggtgcttgatgtgaatgacaacgtgcccacatttacagagaaagtctactcactg
aagatcaatgaagatgctgtggtggggaccagcgtgctgacagtgacagctgtggatagg
gatgtcaacagtgttgtaacttatcagatctccagtggcaacaccaggaaccgcttcgcc
atcactagccagagtggcggtgggctcataaccttagccctccctttggactacaagcag
gagcgccagtatgtcctgacggtgaccgccagtgatggaacacgctatgacacagctcag
gtgttcatcaatgtgacggatgccaacacacatcggcccgtcttccaaagtgccaactat
caggtgatgctcagtgaagaaaaaccagtgggctctaccgtggtggttatcagtgcaacg
gatgaggacacaggggaaaatgctcgcatcacgtatgtaatggaagacaatgttcctcag
tttaaaattgacccagatacaggtgccatcacaacacaaatggagatagactatgaagac
caggcctcctacacattagccatcatcgccagagacaatggcatccctcagaaatctgac
accacctatgtggaaattatcatccttgatgctaatgataatgttcctcagttcctcaga
gatatgtaccaggggactgtatttgaagatgcacctgtctacaccagtgttctccagatc
tctgcttcagatagagactctgggtcgaacggcaggctgagctatacgttccagggtggc
gatgatggagagggagattttttcatagaaccttactctggtatcatcagaactgctcgc
aaactggacagggagaacgttcctgtgtataacctaaaggcctttgctgtagataagggg
gttccaccactgaaagcagctgttaacattcacgttgtagtccaagatataaatgacaat
gctccagtgttcgagaaggatgaactttatattgatgtggaggagaacagcccggtcggg
tccgtcgtggccagaatcactgccgccgatcccgatgagggcaccaacgctcagatcatg
tatcagattgtagaaggaaatatccctgaagttttccagctggacatttttaacggtgac
ctcactgcactcactgatctagattatgagactaaaacagagtacgtcatagtggtccag
gccacctcagcaccactagtgagcagggccaccgttcacattcgcctgatagacatgaat
gacaatcagcctgtactgcaggactttgagattattttcaacaactatgtcaccaacaag
tccaacagttttccatcaggaataataggaaaggtaccagctcatgacccggatgtatcg
gataagctacggtacaagtttgaatctggaaatgaactcagtctgctgctgttgaatgag
gacactggagatctgaggttgagcagggacctggacaatgacaggcccctggaagccccc
atgaccatttccgtcacagatggtctccatcgtgttgtggccctttgcacgctacgtgtc
accatcatcactgacgacatgctgaccaacagcatcactgtgcgtctggagaacatgtcc
caggagcgcttcctctcccccctactcagcctcttcctggaaggtgtagcggctgttctc
tccaccaaacgggaggcagtgtttgtgttcaacatccaaaacgacaccgacgtgcaaggc
tccatcctcaacgtaaccttttcggcgatgcagcctggaggtggcccaggtaaagggacg
ttcttcccgtctgaggagctgcaggaacagatctacctcaacaggactctgctcaggctg
atatcctctcaggaggtgttgccatttgacgacaacatctgcctgcgcgagccctgtgag
aactacatgaagtgtgtgtcggtgctgaagttcgacagctcccctcccttcatcgcctct
gacacggttctgtttcggcccatccaccccatcaacgggctgcgctgccgctgtccggtc
ggttttactggggactactgcgagactgagatcgacctgtgctactcggggccgtgcaag
aacaacggcaggtgccgcagccgagagggagggtacacctgcgagtgcctggaggacttc
acaggtgaacactgtgagctgaatgcatcatcaggccgctgtgtaccaggtgtgtgtaag
aatggcggcaagtgtgtcaacaggctggcaggtggtttcatgtgccagtgtccaccaggg
gagtacgagaagccgtactgtgagatgaccacccgcagtttcccaggacagtccttcatc
accttcagaggcctgcggcaaaggttccactttactgtctccttcatgtttgccaccaga
gaaagaaacgctctgcttctctacaatggcagatttaatgagaaacacgatttcatcgcc
ctggagatcattgacgaacagattcagctcaccttctctggaggtgagacaaagaccaca
gtgtctccctacatcctaggcggggttagtgacggccagtggcactctgtccagctccat
tactacaacaagcctaacattgggcgtctaggcatccctcatggaccgtctggagaaaag
gtggctgtggttgcagtggatgactgtgacatctccatggcgattcgctttggaaagcag
atcggcaactactcctgcgctgcccagggcactcagaccggacagaagaagtcactggat
ctaacaggaccattgttgctgggtggcgttcccaacctgcctgaggacttcccggtcaga
aacagagactttgttggctgcatgaggaacctcagcatcgacagcaaacccatcgacatg
gccagttacattgctaacaacggcaccacagaaggttgtcccgcaaagaaaaacttctgc
gcaaatgatgtgtgtcagaatggaggagtgtgtgtcagcaagtggaacacctacagctgc
gactgcccaaccggttacggaggcaagaactgtgaacaagtgatgccatctcctcagttc
ttcgatggtcaggcgctggtttcctggagtgacccagacatcactgtcgctgttccctgg
tacataggcctcatgttccgcaccagacagcctgctggcaccctgatgcaggccaatgtt
ggaccttcttctaccatcaacctcatggtgagtgagcaacaggtccgtatggaagtgctg
ctgaggcagcagctggtggcggcgctgagcttcccccaagttcgtgtcaatgacggggag
tggcaccacttacttgttgaattaaggagcattaaagacggcaaggacattaaatacatg
gccactgtgtccctggactacagcatgtaccagaagtcggtggagattggtaatgacctg
ccaggtctgaagctgcaaactcttcatgttggaggtttgcctggggagggaaaccatgtc
aagaaaggatttgttggctgcatacagggtgtgcgtatgggtgagacatcaaccaatgta
gccaatgtgaacatggctcagggcctaaagatccgtgtgcatgatggctgtgatttggat
gacccctgcgactccaacatctgccccgacaacagccactgcagcgacgactggagcaca
cacacctgcatctgtgacccaggttactttggtaaggagtgtgtggacgcttgtcagctc
aacccctgtgagcatgtttccacctgcgttcgcaaaccaagttcctctcatggctacacc
tgtgaatgtggacaaaactactatggccagtactgcgaatacaaagtggagaagccgtgt
cctcaaggctggtggggcagtccagtgtgtggaccctgtaactgtgacactaacagggga
tttcataaagactgcaacaagaccactggagagtgtcgctgcaaggacaaccactatcgt
ccagagggtgaggacacttgctacccctgcgaatgtttctcagttggctctgagtctcgg
acctgtgaccccgtcacggggcagtgcccctgtaaaggaggagtcataggtcgtcagtgt
aatcgctgtgataaccccttcgcagaggtcacccccactggatgtgaagtggtgtatgag
ggctgtcccaaggcgtttgatgcaggcatctggtggcccaagaccaagtttggacgccct
gctgccatgaactgtcccaaaggatccatcggtactgccattcgccactgcagtgatgag
aaaggctggttgttgcctgagctcttcaactgcactaccgtcaccttctcccatctaaag
aaactgaacgaggacctgcgccgcaacagctcaaggatggacagcgaacgctccaagacc
atcgtgcgtttgcttcacagcgccaccaacaacaccccgcattactacggcaacgacgtg
aaaacggccgcccagctgctgaattacgtgctgcagtatgagagcaggcaggcgggattt
gacctcactgccatgagggacgcagagttcaatgagaatctggtgcgagcaggcagtgcc
atactggatcctgataacaaggagtactgggagcagatccagaagactgagggcggcacc
gcgcatctgctccgcaacttcgaggactacgccaacactctggcacagaacgtcaggaaa
acctacctgaaacccttcaccattgttactgacaacatgattctaaccgtggactacctg
gatgtgtcagacccggataaggtgacgttccctcggttccaggacatccaggagtactat
cccagagagctcgggtcctccatccacttcccccagttcaacctccacactcagggccac
agagcagagcccactgcggccccttcgactcagaccaatcccccccaagaggaggagcac
acagtctctgataggagacgccgacacctcgagccagccgcccctctgccggtcgccgtg
gtgatagtgtacaaatcactgggaaagctacttccagaaagatacgaccctgatcgcaga
agtctgaggctccccaaccggccagtgatcaacacagccatagtgagcgccacagtccac
accgagggcccgcctctccctcccatcctggacccccccatcaccctggagtacaccctg
ctggagacagaggagaggaccaagcctgtctgtgtcttttggaatcactccattgcgatt
ggagggacaggcggctggtcctctaaaggctgtgaagtgctgaataggaacaacagccac
ataagctgtcagtgtaatcacctgaccagctttgctgtgctgatggatatctccaagaga
gagcacggcgatgttctccccctgaagatcgtcacgtacaccacagtagcagtctccctc
atacttctcctcatcaccttcatcttactgtgcctgctgcaccggctccgctccaacctc
cacgccatccacaggaacctggtggcagcgctcttcttctctgagctcgtcttcctgctc
ggcatcaaccagactgacaacccgtttgtgtgcacagtgatagccatcctcctccattac
ttctacatgtgcaccttcgcctggatgtttgtggaggggctgcacatctaccgcatgctg
actgagctgcgcaacatcaaccacggccacatgaggttctactacgccatgggctggggc
ataccggcaatcatcactggtctggcagtaggtcttgaccctcagggatatgggaaccca
gatttctgttggctctctgtccatgacacactcatctggagcttcgcaggacccatcttt
gtagtagtcctggtgaacatagtgatctttattcttgctgcaaaggcttcttgtggtcgc
aggcagaaggctgtggagaagtctggagctattcctgcacttcgaatggccttcctcctg
ttgctgctcatcagcgccacctggctgctcggtctaatggcggtcaacagtgacgtcatg
actttccactacctttttgctgtcttcagttgtctgcagggagtcttcatcttcttcttc
catgtggtcttcaataaagaagtgaggaaaaacctcaagaacgtcttcacaggaaagaag
agtgtaccagatgagtccagcaccacaagggcgtctttactcacacgttctctcaactgc
aacaacacgtacacagaggacggcccattgtaccgctcgggcattggagagtccacagtg
tctctggacagtacgctcaggtcagctaagagccgcagcagctacctggcttacacactc
agggaggagtctggtcagaagcccagtgtctcttctgggacagctaaaggacacacagat
ctggacggacccctgttccacagaaacggcaccaagggagatgactctgactcagacagt
gagctgtcagtggatgaacacagctcctcctacgcctcctcccactcctccgacagcgag
gacgacgacattgatgttaagcccaagtggaacaatgagaggcagcccattcacagcaca
cctaaagcagattcagtgcccaatcacatgaagccttactggccagcagaggctaccaca
gctagtgacagcgaagatccaggtggtgcagagaggctaagggtggagaccaaggtgaat
gtggagctgcacccagaaaataagcttaaccatattggagaaagagagagggagatgccc
caggagagagacaaacagacgcctagtaacgctaaagatggactgccccccagccaaccc
aacagcaacagcaaccatcaaccagagcagagaaaaggtatcttaaagaacaagatcagc
tacccccctccgctgaccgacaagaacatgaagaaccgtctgagggagaagcttagcgac
tacaacccccccaccatcacctcccctccccccaacaacaacaacaccacctcctccccg
ctgccttcctccgtcaacatcatggccccttcgtcccggccgccctcactggcctccaat
gacggcggtcgaccgggcaaccacgacacaagctcactcatcaagccacccgtcgctccg
cgaccacaggttcccactgggcccccgccagcgggcatctaccgggagaccaacggggga
gtcgccatgcacttgaagtcaggaacagtcaatggaggcaatgagtctgactcagatggc
agtaacgagacttcgatctga
DBGET
integrated database retrieval system
