Lates calcarifer (barramundi perch): 108899827
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Entry
108899827 CDS
T04895
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899827
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108899827
Retrieval pathways
108899827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
VIR_N
CDC45
Motif
Other DBs
NCBI-GeneID:
108899827
NCBI-ProteinID:
XP_018556013
UniProt:
A0A4W6E8D7
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Position
LG18:complement(3730673..3845675)
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AA seq
550 aa
AA seq
DB search
MSSDGNRKQFWKRNAAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPPPATPGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQERQRLDDTTE
LEQREEDTQEEVAEDEEEDVEDEEDRAEEGDVTSPELSFASQSSPYTDGRLVKSHSEAPI
GSPKEAAGECAALHRQRSLPHRPPVIPLVARMADQNTSGTPAMTEREASRLDKFKQLLAG
PNTDLEELRKLSWSGIPRQVRPITWKLLSGYLPANAERRESVLQRKRQEYFGFIQQYYDS
RNDEHHQDTYRQIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGYVQGINDLV
TPFFVVYVFEYIEEEVENFDVSSLQEEALRNIEADSFWCMSKLLDGIQDNYTFAQPGIQR
KVKALEELVSRIDESVHRHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQAEPE
GFSHFHLYVCAAFLVRWRKEILEERDFQGLMILLQNLPTMHWGNEEVSVLLAEAYRLKFA
FADAPNHYKR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgacggaaacagaaaacagttctggaaaagaaacgcagccaaggttcctggc
agcattcaacatgtatatggcgcacaacatccacctttcgacccgcttcttcatgctaat
ctaattaaagcaggcaacaagcctcctccggccacgccaggcaagcccaagaaggccacc
accttccaggagtttgagagcatcacaagcgatgcctgggatgttggggacgacgatgat
gagctgctggccatggctgcacagaaccttaacatcgaggtggtcatggagacggccaat
aaggtaattgagaatcacagcaagcagcaggagagacagaggctggacgacacaacagag
ctggaacagagggaagaggacacgcaggaggaggtggcagaagacgaggaggaggacgtg
gaggacgaggaggacagggcggaggagggagacgtgaccagcccggagttgtcattcgcc
tcccagagcagcccctatactgatggccgcctggtgaaatcccacagcgaggctccaatt
gggtcacctaaagaggcagcaggcgagtgtgcagccctccacagacagcggtctctgccc
caccggccacccgtcatcccactagtggcccgcatggccgaccagaacacatctggtacc
ccagccatgaccgagagggaagcttcccgtctggataagttcaaacagttgttggccgga
cccaacacagatctcgaggagctacggaaactcagctggtctggaatcccacgacaggtc
cgaccaattacgtggaaactcctttcaggttacctaccagctaacgcagagaggagagag
agcgtcctacagaggaagagacaagaatattttggcttcatccagcaatactatgactcc
cgcaatgacgaacaccatcaagacacatacagacagattcacattgacataccgagaact
aatcctcttattcctctttttcaacaagcttctgtccaagagatttttgagcggatcctg
tttatttgggccatccgccacccagccagcggctatgtgcaaggcatcaacgacctggtc
acgccgttcttcgtggtctacgtctttgagtacattgaggaggaagtggaaaactttgac
gtgtccagtctccaggaagaggctctgaggaacattgaggctgacagtttctggtgcatg
agcaaactgctggacggcatccaggacaactatacatttgcccagccaggcatccagagg
aaagtcaaggccctggaggagctggtcagcaggattgatgagtctgtacaccgccacatg
cagcagtacgaggtggagtacctgcagtttgccttccgctggatgaacaaccttctgatg
agggagctgccactacgctgcacgatcagactgtgggacacctaccaggctgaaccagag
ggcttctcccatttccacctatacgtgtgcgcggccttcctggtgaggtggaggaaagag
attctagaggagagggattttcaggggctaatgatcctcctgcagaaccttcccacaatg
cactggggcaatgaggaagtgagcgtgctgctggccgaagcctacaggttgaagtttgcc
tttgctgatgcgcccaaccactacaagagatga
DBGET
integrated database retrieval system
