Lates calcarifer (barramundi perch): 108899847
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Entry
108899847 CDS
T04895
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108899847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108899847
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
108899847
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
108899847
NCBI-ProteinID:
XP_018556051
UniProt:
A0A4W6E128
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Position
LG18:4297418..4308329
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AA seq
801 aa
AA seq
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MEEAADDRDRMTSQQALCVSDQKTSKRPGISTLKLFIVALSFAYFSKALTGTYMKSSITQ
IERRFDLSSTHIGLIDGSFEMGNLLFLAVVSHFGAKLHRPRLIAGGCFLMAVGAFLTGLT
HFFMGRYKYDTVIQVFQNDSMNIAACVDPLKTSEAPEIQIEPSLEDNTACVRESGSNMWI
YVFLGNALRGIGETPVTPLGISYIDDFAKAENSPFYIACLQTITLLGPMFGFLLGSYCAK
LYVDIGYVDMESVTITPKDARWVGAWWMGFLVSSALLLISSIPFWFLPRSLPKQEEDESK
PTPARETPDGTDDALNTNHNLKLTEIAKGFLPSLKRLLGTPAYFLLLCGSILKFNSFIGL
FTFKAKYMEQQFGQSASRANFLIGVLNLPAVAVGIFLGGLLMKRYKLSVVSGAQLSFATS
FMAYLLLLLQFGTKCDNIPVAGLTISYNGTEGISYGSEMLFADCNRDCSCSAEEWDPVCS
DSGITYISPCLAGCLGSSGYGKNTVFHNCSCVSASFPAGSSTSVKLGQCPHAKDCSRSFT
SYMAVSVLSSFINSLGATPGYMVIIRCISPELKSLALGIQALVTRTLGGIPAPVYFGALI
DSTCLKWSMKKCGGRGACRIYDADMYRIIFLGLITCLSGSAYFFIIAVIVLLRRQFRKPE
RETEMQQPKASKEIELKTTMNPTEPGAPKTPKLSHAPKVCVRISADVEEEGEVHRTEWLV
DDGDRLASVNNTKEKQQSESLTEATVEFSRAKLELHGLKPEEEEEKERKDKVCVETNARV
EKEKLKDKNELEKETQHSKKN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagcagatgacagagacaggatgaccagccagcaggctctgtgtgtctct
gaccagaagaccagcaaacgccctggcatctccactctcaaattgttcattgtggcgctg
tccttcgcctatttctccaaggccctcacaggaacctacatgaagagctccatcactcag
atcgagagacgttttgacctctccagcacccacattggactcatagatggcagttttgag
atggggaacttgttgttcctagctgtggtcagccattttggtgccaagctgcatcggccc
agactcatcgccgggggttgtttcctcatggcagtgggggcctttctcactggcctgaca
cacttcttcatgggacgctataagtatgacacagtcatccaggttttccagaatgacagc
atgaacatcgctgcctgtgtggatcctctgaaaacatcagaagcacctgaaattcagata
gagccttctttagaggacaacacagcctgtgtgagagaatctggctccaacatgtggatc
tatgtgttcctggggaacgctctgcgggggatcggagaaaccccagtcacacctctgggc
atctcctacatcgatgactttgcaaaagctgaaaactcaccgttctacatcgcatgtctc
cagaccattactctcctgggtcccatgtttggtttcctcctgggctcctattgtgccaaa
ttatatgttgacattggatatgtggatatggaaagtgtgaccatcactccaaaagatgcc
cgctgggtgggtgcctggtggatgggcttcttggtgtcttctgctctcctgctcatctcc
agcatcccgttctggttcctgcctcgctcgctgcccaagcaggaggaagacgagagcaag
ccaaccccagcacgtgagaccccagacgggacagatgatgccctcaacaccaaccacaac
ctcaagttgactgaaatcgcaaaagggtttcttccgtccctgaagcgcctgttaggaact
cctgcctacttcttgctcctttgtggcagcatcctgaagttcaactccttcatcggcctg
ttcaccttcaaagccaaatacatggaacaacagtttggacagtctgcatccagagctaac
ttcctcataggtgtgttaaacctgccagcggtggcagtggggatcttcctgggagggctg
ctgatgaagaggtataagctgagtgtggtgtcgggggctcagctctcctttgctacgtcc
ttcatggcgtacctcctcctgctgttgcagtttggcaccaagtgtgacaacattcccgtg
gctggcctcaccatttcatacaatgggacagagggtatatcatatggcagtgaaatgctg
ttcgcagactgtaacagagactgctcatgttcagcagaggagtgggaccctgtgtgttca
gacagcggcatcacctacatctctccatgtttggctggctgcctcggctccagtggatac
ggcaagaacacagtctttcacaattgcagctgcgtgtcagcctccttcccagcaggcagc
agtacgtcagtgaagctgggccagtgtccgcacgccaaggactgcagccgcagtttcacc
tcctacatggctgtgtctgttctcagctcctttatcaactctctgggagccactccgggc
tacatggtcatcatacgatgcatctcaccagagctcaaatcactagcgctgggtatccag
gccttggtaaccaggactcttggtggaattcctgcaccggtgtattttggggccctgatt
gattcgacttgcctgaagtggtcgatgaagaagtgtgggggcagaggtgcatgtcgcatt
tacgatgctgatatgtacaggatcatcttcctgggtctgatcacttgtctcagtggttct
gcatatttcttcatcattgctgtcatcgtcctgctcagaagacagtttcgaaagccagag
cgggaaacagagatgcagcaaccaaaagcttcaaaggaaattgaactcaagaccacaatg
aaccccactgagcctggtgctcctaagactcccaaactgtctcatgccccaaaagtttgt
gtgaggatttcagcagatgtggaggaggaaggggaggttcatagaacggagtggcttgtt
gatgatggagatagactcgcctccgtaaataacacaaaggagaagcaacagtctgaatcc
ctgacagaggccactgttgagttctccagagcaaagttagagctgcatgggctgaagccg
gaggaggaggaggagaaagagcggaaagacaaagtctgtgtggagacaaacgcacgggtg
gaaaaagaaaagctgaaagacaagaatgagctggagaaagaaacacagcacagcaaaaaa
aactga
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