Lates calcarifer (barramundi perch): 108899866
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Entry
108899866 CDS
T04895
Symbol
si:dkeyp-23e4.3
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 7
KO
K20632
deleted in liver cancer protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899866 (si:dkeyp-23e4.3)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108899866 (si:dkeyp-23e4.3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
Motif
Other DBs
NCBI-GeneID:
108899866
NCBI-ProteinID:
XP_018556074
UniProt:
A0AAJ7VIU7
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Position
LG20:complement(660371..744405)
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AA seq
1157 aa
AA seq
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MWNMAQTPAVKTPLRRSFSEHVKDSTNKAWDVFWRSVRERRLWEIEAKEACDWLRAAGFP
QYVQLFKDCRFPVDLEWAKRDHHFLDKDALDSLCRRLSTLNKCVEMRLEPRRSKRRGNDC
DEEDFCAISPSWTYDRRARRWRRLDSAVDVSLCDDGDRHDVCSIHSSSSTDSEGHDGQHK
RRREAGGGTALMTAAAGGTTDDQETSRSSSRCSSTNKTPSLDTSFSGPPSPGESGGGSST
ASLEADGCFPDKPPRKKCTSLLRKMEKLRLRGTSGSSSGDRARYVISGPVLIQEEEQMER
LLCPSSLQGRPSSRASSSPSSSHALSSSSSSSNSHSESSSTVSTPSPVTRVRSNCKRSNS
GVGTTRNNQNHMGTEDYRNQINNNNNSSHESLVFHIPHGHKPGTFPTSLAHKHAMLSPII
DSTSVNWRTGSFHGYRGRNSCRRGGTSSLAAGDRNPSSASPSCGVGVPSPLATLDHRLSI
YDNVPDDQPLSEGEGGDAERTGEESEVSRLLADEDVFSALDSVLERISDLQQLVSTWSEN
LSDDSQRASSSSSSSVLLVFLHQDSPGHCSSAASPCPSSPSHIHLEVQHPEEEEEEEEEE
EEKVPVNGEEVKSRSPQPRSRVSQHLHWSSEQSLPSMPTSPGVENQSASQFLLLQKLALL
KLTALMDKYSPSSKQGWNWTVPKPVRKTKAMEVKGRRVFGVPLLLSVQQTGEPLPPSILR
ALVYLRTECLDQVGLFRKSGVKSRIQYLRELVESNPDGISYDSQSAFDVADMVKQYFRDL
PEPIFTSKLCESFLHIYQYFPKDQQLAAAQAAILLLPDENREALRTLLHFLRDVVACVDE
NQMTPTNVAVCLAPSLFHLNTLKRDANAARSHRKYSLGCPNQRDLSENLAATQGLANMIT
EAQRLFQLPEFWPGRCLSPAGPTEDSLSEEGRGPVSSSQSGGEEEQEERRNKLQQSTQLL
LKEAREKSRGWESHPAPEHVDLAFKKMDDGCPLWMWRGSVEVDAPQKELLHRLLREHQLW
EGSLRQATVVQTLSKDAEVYHYLLQSQGHGLDSRPPQEHLLLRTWQSDLTSGPLYLSSVS
TEHPEVLVEGVRAQVHSCLYLLEPSGARKTRLTHLCRTDTRGRSQQWHSRVSGHLLASAL
LAVRDSFRAADYKETKI
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatatggctcagactccggcggtgaaaactcctctgcggagatccttcagtgag
catgtgaaagactccaccaacaaggcttgggatgtcttctggaggagcgtgagggagagg
cggctgtgggagattgaagccaaggaggcctgtgattggctgcgagcggccggcttccct
cagtatgtgcagctattcaaagactgcaggttccccgtcgacctcgagtgggcgaagcgt
gatcaccacttcctggacaaggatgctctcgattcgctctgcaggagattaagcacttta
aacaaatgtgtggaaatgaggctggagccgcggagatcaaaacgcaggggaaacgactgc
gatgaggaggacttctgcgccatcagccccagctggacctacgacaggcgagcgcgacga
tggcgacgcctcgactccgccgtggacgtgtctctgtgtgacgacggcgaccgccatgat
gtgtgctccatccacagctccagcagcaccgacagcgaaggccacgatgggcaacacaag
aggcgcagggaagccgggggaggaaccgctctgatgactgccgccgccggcggcaccaca
gacgaccaggagaccagcaggagctcgtcccgctgctcctccacgaacaagaccccctcc
ctggatacctcattcagcggacccccgtcccctggtgagagtggcggaggatcgtccacc
gcaagtctggaagctgacggctgcttcccagacaaaccgcccaggaagaagtgcaccagc
ctcctgaggaagatggagaagctgaggctgagggggacgagtggaagcagcagtggcgat
cgggcccggtatgttataagtgggccagttctgatccaggaggaggagcagatggagagg
ctgctctgcccatcgagtctgcaaggtcgacccagcagccgggcgtcctcctcgccctcg
tcttctcacgccctcagcagcagcagcagcagcagtaacagccactcggagagcagcagc
accgtcagcacgcccagccccgtcacccgggtcaggagcaactgcaaacgctccaacagc
ggcgtcggaacgacccggaacaaccagaaccacatgggaacagaggactacaggaaccag
atcaacaacaacaacaacagcagccacgagagcctggtcttccacatcccccacggacac
aaaccagggaccttccccacctccctcgcacacaaacacgccatgctgtcccccatcatc
gacagcacctccgtcaactggaggaccgggagcttccacggttaccgggggaggaacagt
tgccgacgcggcggcacgtcgtcgcttgccgccggcgacaggaacccctcgtctgcttcg
ccgtcctgtggcgtcggcgtccctagcccgctcgcgacgctggatcatcggctgagcatc
tacgacaacgtgcccgatgaccagccgctgtctgagggtgaaggcggcgatgcagagcgg
acgggtgaggagtcagaggtgagtcgactgttggcagacgaagacgttttctcagctctg
gacagcgtcctggagaggatcagcgacctccaacaactggtctccacctggtccgaaaat
ctgtcggacgactctcagagagcctcctcctcctcctcctcctccgtcctcctcgtcttc
ctccaccaggactcaccaggtcactgctcctcggccgcctccccctgcccgtcctccccc
agccacatccacctggaggtgcagcatccagaggaggaggaggaggaggaggaggaggag
gaggagaaggtaccggtgaacggagaggaggtgaagtcgagatcaccacaacccaggagc
agggtgagtcagcacctgcactggtccagcgagcagagtctgccctccatgcccaccagt
ccgggggtggagaaccagtcggcctcccagttcctcctgctgcagaaactcgcgctgctc
aaactcaccgctctgatggacaaatactccccgtccagcaagcagggctggaactggact
gttcccaaaccggtgaggaagaccaaggcgatggaggtgaaaggtcggcgggtgtttgga
gtccctctgctcctcagtgtgcagcagacaggagagccgcttcctcccagcatcctccgg
gccctggtctacctgaggaccgaatgtctggaccaggtcggtcttttccggaagtcgggg
gtcaagtctcgtatccagtacctccgcgagctggtggagtccaaccccgacggcatttcg
tacgacagccagtccgccttcgacgtcgccgacatggtgaagcagtacttcagagacctg
cctgaacccatcttcaccagcaaactctgcgagtccttcctccacatttaccaatatttt
cccaaggaccagcagttggctgcggctcaggcggccatcttgctacttcctgacgagaac
agggaggcgctgcggacgctgctccacttcctgcgggacgtggtggcctgcgtggacgag
aaccagatgactccgaccaacgtcgccgtctgcctggcgccgtcgctcttccacctcaac
accctgaagagagacgccaacgcagccaggagtcacaggaagtacagcctgggctgcccg
aaccagcgggacctgagcgagaacctggctgccacccagggcctggccaacatgatcacc
gaggcccagagactcttccagcttccagagttttggcctggtcggtgtctaagtcctgca
ggccccactgaggactccctgtctgaggaaggaagaggcccggtgtcctccagtcagagt
ggaggtgaggaggagcaggaggagaggaggaacaagctgcagcagagcacccagctcctc
ctgaaggaggccagggagaagagccgaggctgggagagccacccggctccagagcatgtg
gacctggcctttaaaaagatggacgacggctgcccgctgtggatgtggcgaggctccgtg
gaggtggacgccccccagaaggagctgctccaccggctgctgagagagcaccagctgtgg
gagggaagcctgcgccaggccaccgtcgtccagaccttgtccaaggacgccgaagtctac
cactacctcctacagagccagggccacggcctggactcccggcccccacaggagcacctg
ctgctcagaacctggcagtcagacctgacctccggacccctgtacctgtcctctgtatcc
acggagcaccccgaggtcctggtggaaggggtcagggctcaagtccactcctgcctgtac
ctgctggagcccagcggagccaggaagacccggctgacgcacctctgtcgaaccgacacc
agaggtcggtcgcagcagtggcacagcagagtgagcggacatctcctggcctcggctctc
ctggccgtcagagactcgttcagagctgcagactacaaagagaccaagatctga
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