Lates calcarifer (barramundi perch): 108899988
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Entry
108899988 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108899988
Organism
lcf
Lates calcarifer (barramundi perch)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
PS-DH
adh_short
PP-binding
PKS_DH_N
CurL-like_PKS_C
Thiolase_N
adh_short_C2
ACP_SdgA_C
ADH_N
RhiE-like_linker
YMF19_C
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
108899988
NCBI-ProteinID:
XP_018556262
UniProt:
A0AAJ7QHD2
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Position
LG24:15606458..15613227
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AA seq
2084 aa
AA seq
DB search
MEDPEDNVAVIGIGCNFPGGEGLDNFWRVLLEGRSCVAEIPAERFDTTFWYDANDSKPGK
THTTKAALIEGFNEFDHKFFGITESEADFMDPQQKLLLQCTYRALEDAGMAMESISGSRT
GVYIGLMNRDYEMLRSNSPTTITHYSGTGTAMSMAANRISFTFNLTGPSFAIDSACSSSL
VALHLACQAIKQGDCEMALFGGVNCIIEPRVFVALSKAKMISPEGISKPFCSRADGYGRG
EGCGIVLLKLLKNAVKDCNKIWGTISKTAINQDGHSVSPITKPSMTQQEELLRRIYSESD
LADVQYIEAHGTGTPVGDPTEAGSISNVITKARPPGSETLWIGSVKGNIGHTESAAGVAG
LIKVLLMMKHEIFVPSVFYSEDSASVDVKALNLNIPSKTERWETNRSFQRVAGINSFGFG
GTNAHVILREYRKTTVPKQIPKGCLNLFVVSAASEKSLILSIADTQQKLCSAQTVDLQAL
SYTSACGRSHHRHKYRKAFPTSSLSDLQNQLTSALGSKVESTKSDFQVVFVFCGNGVAYR
GMCKQLMRDVPVFRDKVREIENLFQTHKSITISHWLAGDYDNDDLSKPNIIQPLLFAIQV
GISTLLKHWGVKPDAVLGHSVGEVAAAHCSGLLSLEDAVKVLYHRSTLQSKVTGGKMLVV
SNVAVEKVLEIPQVSSGKICVAAFNSPQSCTLSGDSDAIDILCERLKSLFTLKNIFLHIL
DVPAAYHSHMMDPILDDIERDIGLLDANTMECKLFSTVTADRCSNGDFSTGRYWAKNIRE
PVLFEPTLHAVTKDKQSGRNVIFVEIGPRRALQRNVHETLGSDTIVLPSVQPEKDCDTIL
STLAKVFELGINVDWRQFYKGCETLPTALPIYQFDNSKKELNFEDVRKGNELVALAPHSL
ISQIKLDNKECICHLSLETAPYLWEHKNNGVSIVPGAFYVELAYASVMASLKPKKPVSLL
QLSVTFESLFALSSNYHQLKIILEHAKNEGSFKIQSSVAMHASGTYRSTDGQPLLQEPTI
LLNMISQRCKLVMKRKEIYSILSEAGFEYGSVFKQLDDVHFGDEFKEAVTEIQVPGELLK
HLHDYFIHPVLLDYFLQMTAVMAIGRLTAKQGFPSAIGSVVISGPLQEKMVMYLLVTQET
PDFLEVCGCFSTTEGEVLVELKRVRISFFGSCSNVFQSLFFHNEIFQICDKKDLLNCEIK
AIVFEDKLSIAKRLRPYLHPESVIVESRDNWILDQLRDLVFHSLNTNVDLENVLFIWGVE
NLSHLSSEQTLERLVTCCELYRQIVLALKERRPSCTVRVITYRSTEMTVDHVSPGFVLSG
MTRACAAEMASLSFQLIDLASVTSEDIQMLVHVINTCKQQEIMIAKGQASATRIARTPVM
DKASCEDDLQSEYMSNFALQTTDPYRMSHLSAILYNTNVNPIQEKSVEIQLTSVCVHSSD
YLPVTASHLNFSKTMYWSQHASHQHKLLILDFSGTVTALGKDVHSLRVGDHIASCYPVTA
TTKIRIPEAVCYSTKRLPFLKETPCVSYFVLAWEILQSMLSVVKQQHRKMVIVSSNSASA
LMKVLALTANRSGWNVSSRPHFRGAPLHFDHTCAFVFLPPFDHSWQEIQGSSGFERHIIF
VCSSHMSSSHSADLFVSKSEHVHVHKLDVANVLQRANLQAQNRMISNWLMSLGFDSVSLP
LKRETFQLSSSKEPQTDVDSESYFTTKTVRQVVLDNGESHCLLSDIPLLTRPGLLFKQNC
VYIVSGGLSGLGLETVKFITHNGGGRIATLSRRILTDEMQFDMELLQKRYGVTIINVQCD
VSVLMQVVDAVSEIEKRFPSCPIKGVFHSAAVLHDAMIETLDESLFRKVLQPKVSGALNL
HYTTLHNKLDYFVCYSSISSFIGNASQCNYAAANSFLDGFCHYRRNLGLAGQSINWGPLN
LGLLLNKDHFQKFLEAKGMMIMDVCEVHDALEKCLLMNRPQQVICKFNFKNLYIHVLSQN
ASLRERLSALVEIELKDDMSNEPKVQYLPSTHESVRIIVRDISSVSVDEMDDDSALCALG
IDSMLAMTLQNKIFQETGVNVPLVRILDPNSTLATLATIVMNDG
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atggaagatccagaggataatgtagctgtcatcgggattggatgcaattttcctggagga
gagggattggacaatttttggagggttctgttggaaggaaggagctgtgtagcagaaatt
ccagcagagaggtttgacaccacattttggtatgatgctaatgatagcaaacctggaaag
acacatacaaccaaagcagctctgatagaggggtttaatgagtttgatcacaagtttttt
ggcatcactgaatcagaggctgatttcatggaccctcagcagaaactcctcctgcagtgt
acatacagggcactggaggatgcaggaatggctatggaaagcatcagtggaagtagaact
ggggtctacataggtcttatgaacagggattacgagatgctccgaagtaatagtcccaca
acaataacccactacagtggcactgggacggccatgagtatggctgccaataggatttcc
ttcacctttaatctcactggcccttcttttgccattgacagtgcctgttcttcatcttta
gtggctctacatttagcctgccaggctataaagcaaggagactgtgagatggctttgttt
ggaggagtcaactgtatcatagagcctagagtgtttgttgctctcagcaaagcaaagatg
atctcacctgaggggatcagcaaacctttctgcagcagagcagatggttacggtagaggg
gagggctgtgggattgttctcctgaagctgctgaaaaatgctgttaaagactgcaacaaa
atatggggtaccatcagcaaaacagcaatcaaccaagatggacactcagtctctccaatt
accaaaccctccatgacacaacaagaggagctcctacgaagaatctactctgagtctgac
cttgcagatgttcagtacatagaggcacatgggactggaaccccagttggagacccaaca
gaggcaggtagcatctcaaatgtcatcactaaagccagacctcctggttcagagacactg
tggattggctctgtgaagggtaacattggacatactgaatctgcagcaggagtggcagga
ctcattaaggttctccttatgatgaagcatgaaatctttgtaccatcagtgttctactct
gaagacagtgcaagtgtagatgtaaaagctcttaatctaaatattccatctaaaactgaa
agatgggagactaacaggtcatttcagagggtagctggaattaacagctttgggtttggg
ggcacaaatgcacatgtgattttaagagagtatagaaagaccactgttcccaaacagatc
ccaaaaggctgtctaaatctctttgtagtatctgcagcgtctgagaaatcattgatccta
tccatcgctgacacccagcaaaagctttgcagcgctcagacagttgacttacaggcattg
tcatacacctcagcatgtggaaggagtcatcacagacacaagtataggaaggccttccca
acatcctccctatcagacttacagaaccagctgacatctgcactgggatcaaaggttgaa
tcaacaaagtcagacttccaggtggtgtttgtgttttgtggaaatggagttgcctacagg
ggtatgtgcaagcagctcatgagagatgttcctgttttcagagataaggtcagagaaatc
gagaatctcttccagactcataaaagcatcactatcagtcattggcttgctggtgactat
gataatgatgatttgagcaagccaaatatcatccaacctcttctttttgcaattcaagtt
ggcatatccactctcttaaagcactggggtgtcaaacctgatgctgtgcttggacactct
gtaggcgaggttgcagcagctcattgttctggcctcctctctctagaggatgctgtgaaa
gtgttgtaccaccgcagtactcttcagagtaaggtcacaggtgggaaaatgcttgtggtc
agtaatgtggccgtagaaaaggtactagaaatcccacaggtctcctctggcaaaatttgt
gttgcagctttcaacagccctcagtcctgcacactgtcaggggattcagatgctatagac
atcctctgtgaaaggctgaagagtctgtttacacttaaaaacatcttcctccatatcttg
gatgttccagcagcataccatagccatatgatggatcctatattagatgacattgagaga
gacataggtcttttagatgccaacaccatggaatgcaaactcttttcgacagtgactgca
gacaggtgttcaaatggtgacttcagcactggcaggtactgggcaaagaacatcagagag
cctgttttatttgaaccaacactacatgctgtcacaaaagacaagcaatcagggagaaat
gtgatctttgtggagattggacctcgtagggctctccaaagaaatgtacatgagactctg
ggaagtgacactatagttcttccctccgtccagccagagaaagactgtgacacaatcttg
tcaaccttggcaaaagtatttgaactgggcattaatgtggactggcgtcaattttacaag
ggttgcgaaacattgcccacagctctgccaatctatcagttcgacaactcaaagaaagaa
ctgaattttgaagatgtgagaaaaggtaatgaattagttgctcttgctccccattcactc
atatcccaaataaagctggataacaaagagtgcatatgtcacctctcattagagactgca
ccatatctttgggagcataaaaacaatggtgtgtccattgtgccaggtgcattttatgtt
gagttagcttatgcctcagtgatggcaagcttaaaaccaaagaaacctgtttctttgctc
cagctcagtgttacatttgagagtctgtttgcactcagctcaaactatcatcagttgaag
ataatacttgagcatgcaaagaatgagggttcatttaaaatacagtcttctgttgcaatg
catgcctccggtacatacaggagcacagatggccaaccactgttacaggaaccaactatt
ttgctcaacatgatcagtcaaaggtgcaaactagttatgaaaagaaaggaaatttattca
attctctctgaggcaggatttgaatatggctctgtcttcaaacagcttgatgatgtgcac
tttggggatgaattcaaggaagctgtgacagaaattcaagtccctggagaacttctaaag
caccttcatgactatttcatccaccctgtgttgttggactatttcctgcaaatgactgca
gtaatggctattggacgactaacagccaagcagggattcccctcagctataggttctgtc
gtcatttcaggaccgttgcaagagaaaatggtcatgtatttactagtgactcaagagaca
ccagacttccttgaagtgtgtggttgcttttctaccacagagggggaagtactagtggaa
cttaagagggtgaggatctcattttttggcagttgctcaaatgtttttcagtcacttttc
tttcacaatgaaatattccaaatttgtgacaagaaagatttgctaaattgtgaaataaaa
gcaatagtttttgaagacaaactcagtattgctaaaagacttaggccatatttgcaccca
gagtcagtcattgtggagagcagagacaattggatcctggaccaacttcgagatttagtg
tttcactctcttaacactaatgtggatttggaaaatgttctctttatttggggtgtagag
aacctcagtcatttgtcatcagagcagacgttggagcgcttggttacttgctgtgagcta
tatcgtcagattgtattagccttgaaagagagaagaccgtcttgcaccgtccgtgtcata
acatatagatcaacagaaatgactgttgaccatgtcagtccgggttttgtgctgtctggt
atgacaagggcttgtgcagctgagatggcaagtctctcttttcagctgattgatcttgcc
tctgtgaccagtgaagatattcaaatgctggttcatgtaatcaacacctgcaaacaacaa
gagatcatgattgctaaagggcaggcatcagcaacaagaatagcacgaactccagtgatg
gacaaggcttcatgtgaagatgatttgcagtcagagtatatgagtaactttgctctacag
acaactgatccatacagaatgtctcacttgtctgccatcctctacaacacaaatgtaaat
cctatccaagagaagtcagttgagattcagctaaccagtgtctgtgtgcactcatctgat
tacctccctgtcaccgcttcacatctaaacttcagcaagacaatgtactggagccagcat
gcatctcaccagcacaagcttctgattttagactttagtggcactgtcacagcgcttggg
aaagatgttcacagtctaagagtgggagatcacattgcatcatgttatccagttactgcc
acaacgaagattagaattcctgaagctgtgtgctacagtacaaagagactcccatttctg
aaagagaccccatgtgtgtcttactttgtactggcatgggagatcctgcagagtatgcta
tctgtagtaaaacaacagcacagaaaaatggtcattgtctcctccaactcagcatctgct
ctgatgaaagttttagctctaacagcaaacaggtcaggctggaatgtctcctctcggcca
catttcagaggagcacctctacattttgatcatacttgtgcatttgtttttcttccccca
ttcgatcactcttggcaggaaatacaaggcagcagtggctttgagaggcacattattttt
gtatgtagcagtcacatgtcatcctcacactcagcagacctgtttgtatcgaagagtgaa
cacgtgcatgtacataaactggatgtggctaatgttttgcagagagccaatctgcaagca
cagaacaggatgatttctaactggctaatgtcattaggctttgattcagtatctctacct
ttgaaaagagagacatttcaattatcaagctcaaaagagcctcagactgatgtggattct
gagtcctatttcaccacaaaaacagtacggcaggtggttttagataatggagaatctcat
tgtctattatctgatatccctttactcaccaggccaggactgctttttaaacaaaactgt
gtttatattgtaagtggaggcctttctggtttgggacttgagacggtgaagttcatcacc
cataatggtggaggtcgcattgcaacactgtctagaaggattctgacagatgaaatgcag
tttgacatggagctcctccagaaaagatatggggttacaatcataaatgtccaatgtgat
gtgtctgtgttgatgcaggtggtggatgcagtctcagagattgagaaaagattcccctcc
tgtccaatcaaaggagtgtttcacagtgctgcagtgttacatgatgcaatgattgaaacc
cttgatgagtctctctttcgaaaggtgctgcagcccaaagtgagcggggctctaaatctc
cactatacaacacttcacaacaaacttgattattttgtgtgctactcctccatctcttca
ttcattggcaatgcctcacaatgtaactacgcagcagccaattctttccttgacggattc
tgtcattatcggagaaaccttgggctcgctggacagtccatcaactggggccctttgaac
ctcggtctcttgttgaacaaggaccacttccaaaagttcttagaggcaaaagggatgatg
ataatggacgtgtgtgaggttcatgacgcacttgaaaagtgcctcttgatgaaccggcca
caacaagtcatatgcaagttcaacttcaaaaatctttacattcatgttctttcacaaaat
gcatctctcagagaacgtctgtcagctttagtggaaatagagctcaaagatgacatgagt
aatgaacccaaagttcagtatttgccttccacacatgaaagcgtgagaataattgtcagg
gacataagcagtgttagtgtggatgagatggatgacgactctgctctgtgtgcactgggt
attgactcaatgttagccatgactcttcagaacaagattttccaggagacaggtgtgaat
gtacctttggttagaatactagaccctaacagtacactggccactttggcaaccattgta
atgaatgatgggtaa
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