KEGG   Lates calcarifer (barramundi perch): 108899992
Entry
108899992         CDS       T04895                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108899992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108899992
Spliceosome [BR:lcf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108899992
 Complex B
    108899992
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 108899992
NCBI-ProteinID: XP_018556266
UniProt: A0AAJ7QHG3
LinkDB
Position
LG24:15133874..15141925
AA seq 546 aa
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGV
YKDMSVTPVRPPIPVLPQVGLVNPVLASPPVLSNQAGGSNQQEKKEEKEEMLQDGTGQEM
LSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGSV
NRVIIYQEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFN
SSDLSA
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcggttacggagactgcgggaggtgaagctctgacgatggagaatggacagggcaca
ggctccaagcttggcctgccgcctctcactccagagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccattgcccat
cagcaacaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagaggcaacgcgctctagccatcatgtgtcgg
gtgtatgtgggctccatatactatgagcttggtgaggacaccatcagacaggcctttgcc
cccttcggcccaatcaagagcattgacatgtcttgggattctgttacaatgaaacacaag
ggttttgcctttgtggagtatgatgtgccagaggctgctcagctggctctggagcagatg
aactcagtcatgttgggggggcgaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaaccggatctacgtg
gcgtccgtccaccctgacctgtcagatgatgacatcaagagtgtgtttgaggccttcgga
aggatcaagtcttgcacgttagccagagaccccacaacagggcgacacagaggctttggc
ttcattgagtatgaaaagcctcagtcagccctggacgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgggtgggcaaagccgtgactccgcctatgcccctactg
acccccacaacccctggtggtctgccacctgctgcagctgtggctgcagcggcagccacc
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggcgcatcagtcttgggggcgttagctgcgccccaacttctcggtcag
caaatgggaatacctcaggctgttatggctgcccaggcaccaggggtcatcacaggtgtg
tacaaggacatgagtgtgactccggtgcgtcctcccataccagtgcttccccaggttggt
cttgtgaacccagtgctcgcatcaccaccggtcctgtctaaccaagctggcggctccaac
caacaagagaagaaagaggagaaggaagagatgcttcaggatggcacagggcaggagatg
ttgagcgaccaagagcacatgagcatctcaggcagcagtgccagacacatggtgatgcag
aaactgcttagaaaatcagagtccactgtgatggtgcttcgaaatatggttgggccagag
gacatcgatgacgacctggagggtgaggtgacggaagagtgcggcaagtttggctctgtc
aacagagtcatcatttaccaggaaaagcaaggagaagaggaggatgcagatatcattgtc
aaaatctttgtagagttttccatggcctcagagatgaacaaagctattcaggcactcaat
gaccgctggtttgggggtcgcaaagttgtcgcagaggtgtacgaccaagaccgtttcaac
agcagtgacctgtctgcataa

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