Lates calcarifer (barramundi perch): 108900031
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Entry
108900031 CDS
T04895
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1 isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108900031
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
108900031
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
TIP49
AAA_5
RuvB_N
AAA_lid_PRS2_C
DUF815
Mg_chelatase
IstB_IS21
PhoH
AAA_33
AAA_28
AAA_17
AAA_18
Zeta_toxin
AAA_14
nSTAND3
AAA_25
AAA_7
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
108900031
NCBI-ProteinID:
XP_018556346
UniProt:
A0A4W6DX67
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Position
LG24:15598220..15605753
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AA seq
722 aa
AA seq
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MFSLSTSFQPQQMIVPLSQLINALHSLKNSATASVQTLHKDFIPEHSSYLKEPTVTLRDL
GLSEIRVSQLDELVSRLLPSPGPETPPAVPSTWKTSHVSADSFFHNKHGFSHRRLGVFGS
PIFHRQYHSPLKEVSSQLQFLPVWVQSRGFKTLRSKTRRVESGYDGPVESESYTPAFMKG
LLLREKGPEVQSLDQVIKQRNLPENQQEAFKTGFTEGFMRSQAYTQRTQDSLRRTRLILL
VLLLVGIYGLSRTPFLSGKGSFSDAVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKSE
LQDVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDE
MFVGVGAGRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGF
KPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPRPDVKGRTEILNWYLTKIKVDSAVD
AEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKDLEFAKDKILMGPERRSVEIDK
KNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSETRAQLLAQ
MDVSMGGRVAEELIFGDDYITTGASSDFDGATRIAKMMVTRFGMSDKLGVMTYGDVTKQS
PETQAAIEQEVRILLKDSYERAKSILKTYSKEHKKLADALLTYETLDAKEIQMVLEGKSL
DH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcgacgtcgtttcagccacagcagatgatagtgcccctaagccagctc
atcaatgccctccactcactgaagaactcagccaccgcttcagtccagaccctgcataaa
gacttcatcccagagcacagttcatatctcaaagagcccactgtgactctgagggacctt
ggcctgtcagagatcagggtaagtcagctcgatgagctggtcagcaggttactgccttct
ccaggacccgaaacccctcctgctgttccctcgacatggaagaccagtcacgtttctgca
gacagcttctttcacaacaagcatgggttttcacacagaaggctgggggtttttggctcc
ccaatattccacagacagtaccacagtcctctaaaagaagtctcctcacagctacagttt
ctgcctgtatgggtccagagtcggggtttcaagacactaagatcaaaaaccagacgagtg
gagtctggttatgatggaccagtggagtctgagtcctacacaccagcctttatgaagggg
ttgctcctgagggaaaagggaccagaggtgcagtcgctggaccaagtgataaaacaaagg
aaccttccagaaaaccagcaggaggctttcaagactggtttcactgaggggttcatgagg
tcccaggcctatactcagagaacacaagactcgctgaggagaaccaggttgatcctgttg
gtcctcctacttgttggtatttatggcctgtcaagaaccccatttctctccggtaaaggc
tccttttctgatgctgtaaggttccgcaccacatctggccttgactcagcagtcgacccc
gtccagatgaagaatgtgacatttgagcatgtcaaaggagtggaggaggcgaagagtgaa
ttgcaagatgttgtcgagtttctcaagaacccacagaagttcactgttctgggtggaaag
ctgcctaaagggatcctccttgttggtccacctggcactggaaagaccctgttagcacga
gccgtggctggggaggctgatgttcccttctactacgcatccggatcagagtttgatgag
atgtttgtgggtgttggagcaggccgcatcaggaaccttttcaaggaggcaaaagctaat
gctccctgtgtcatcttcattgatgagttggacagtgttggagggaagaggattgagtct
cctatgcatccgtactccagacaaaccattaaccagctgctggctgaaatggatgggttt
aaaccaaatgaaggagtcatcgttattggtgctacaaactttgctgaggctctggataat
gctctggtcaggccagggaggtttgacatgcaggtgacggtacctcgcccagatgtgaaa
ggacgcactgaaattctcaactggtacctcaccaagattaaagtggactctgccgtggat
gcagagattattgctcggggcacagttggattctctggtgcagagctcgagaacctggtc
aaccaggcagccctgaaggcggccgtggacgggaaagagatggttacaatgaaggacctg
gaatttgctaaggacaagatcctcatgggccctgagaggaggagtgttgaaattgacaaa
aagaataagaccatcactgcctaccatgagtctggccatgccatcgttgcctattacacc
aaagatgcaatgcccattaataaggccactatcatgcctagaggaccaactcttggccat
gtttccatgctcccagagaatgaccgctggagtgaaacaagagcccagctgctggcgcag
atggatgtcagtatgggtggtcgagtagcagaggagctcatctttggagatgactacatc
accactggagcctccagtgactttgatggtgcaaccagaatagcaaaaatgatggtgacc
aggttcggcatgagtgacaagctcggtgtcatgacctatggtgacgtaaccaagcagagc
ccagagacacaagctgccatcgaacaagaagtcaggattttgctcaaggattcatatgaa
cgtgctaaaagcatcctgaagacttacagcaaggagcacaagaagctagctgatgccctg
ctaacatatgaaactctggatgccaaagagatccagatggtgctggagggcaaatcactg
gaccactag
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