Lates calcarifer (barramundi perch): 108900060
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Entry
108900060 CDS
T04895
Name
(RefSeq) CD166 antigen homolog
KO
K06547
activated leukocyte cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108900060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108900060
04090 CD molecules [BR:
lcf04090
]
108900060
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Other
108900060
CD molecules [BR:
lcf04090
]
Proteins
108900060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
C2-set_2
V-set
I-set
Ig_PDGFR_d4
C1-set
Ig_4
Izumo-Ig
Par3_HAL_N_term
DUF2808
Syndecan
Motif
Other DBs
NCBI-GeneID:
108900060
NCBI-ProteinID:
XP_018556383
UniProt:
A0A4W6DKS7
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All DBs
Position
LG20:23621918..23675589
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AA seq
558 aa
AA seq
DB search
MASTSFQLLAFVIAGTLSQVWGTESVTAMYGETIVIPCSDGGMAAKDLMFIKWKYEKDDG
TPGDLLIKQAHSDQATVQATDNYAQRVSIDDKFSLLITQASLKDQKTFTCMVVSVSNLME
YPVSVVVHKKPSSVQIMDKSEVLQRDKLTTVGTCVATDANPAATITWKKNGKPLLSDGKA
VAINPSLKLDPATGLSTTSSTLQYAATKDDVNAVFACIATHESTNQETDLEPFPIHYPSE
TVNLEIKTPVAEGDNVTLKCQGDGNPPPSSFFFHIKGRKVLVENSDTYTLTTINREDTGE
YKCSLSDNEKLEASQSILVNYLDLSLSPTGKIVKTVGDPLPVKMEKNTSGDAKVSWTKNG
VAVKEPEFSKLTYADAGIYLCEVSTTSFTRHQSFELVVEGKPVITSLTKHRVDDAKHKVL
TCEAEGVPEPSFQWSINSTNEESSYINGKAIHKITVIPKVNLTVSCSVTNRLGEDVMTIN
ISSIFEEGEGNKDSSEDLEDQSKLIVGVVAGLLIAAAALGLIYWLYMKNSRQGSWKTGEK
EVGTSEENKKLEDNNHTV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacttctttccagctgctggctttcgtgatagccgggacgctttcccaagtg
tggggcacagaaagtgtgactgctatgtatggagagaccattgtcataccatgcagtgat
ggaggtatggcagcaaaagatctgatgttcatcaagtggaaatatgagaaagatgatggc
actcctggtgatctattgatcaaacaggcccacagtgaccaagccactgttcaggccacg
gacaattatgcccagcgggtcagcatcgatgacaagttcagcctgctaatcacccaggcc
tcacttaaagaccagaagaccttcacctgcatggtggtgtcagtcagcaacctcatggag
taccctgtctctgttgttgtccacaagaaaccgtcgtcagttcagattatggacaagtca
gaagtactgcagagggacaaactaacaacggtgggaacatgtgttgcaacagatgcaaat
cctgcagccacaattacatggaaaaaaaatgggaagcctttgctatctgatgggaaagct
gttgcgatcaaccccagcttgaagctggatccagccacaggcctgtccaccacttcctcc
accctccagtatgcagccaccaaggatgatgttaatgcagtctttgcttgcattgccact
catgagtcgacaaatcaggagacagacctggaaccctttcctattcactacccatcagag
acagttaaccttgaaattaagacgcccgttgcagaaggagacaacgtgacgctgaagtgt
cagggtgatggcaaccctccacccagctccttcttcttccacatcaagggccggaaagtg
ctggtggaaaattcagacacctacactttgactaccatcaacagagaggatacaggtgaa
tataaatgctccctgtctgacaacgagaaactggaggcctcccaaagcatccttgttaac
tatctggacctgagtctgagtcccactgggaagattgttaagacagtaggggaccccttg
cctgtgaagatggagaagaatacctcgggtgatgctaaagtgtcatggacaaagaatgga
gtggctgtgaaggagccagagtttagcaagttgacctatgctgatgcgggaatctaccta
tgtgaggtctccacgaccagcttcacacgacatcagagctttgaactggtggtagaaggg
aagcctgtgatcaccagcctaaccaaacaccgtgtcgatgatgccaaacacaaagttctg
acttgcgaggctgagggagtgccagaacccagcttccaatggagcatcaatagcacaaac
gaggagagctcttacatcaacggcaaggccatccataaaatcactgtgatcccaaaagtg
aacttaactgtcagctgcagcgtcaccaacaggctgggagaagatgtcatgaccatcaat
atttcctctatttttgaagagggagagggaaataaagactcttcggaggatttggaggac
cagtcaaagctcatagtgggtgtcgtggcagggctcctcatagctgctgcagcactagga
ctcatctactggctctacatgaagaattcaagacaaggaagctggaaaactggtgagaag
gaggtgggaacatctgaggagaacaagaaactagaagacaacaatcacactgtttaa
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