Lates calcarifer (barramundi perch): 108900101
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Entry
108900101 CDS
T04895
Symbol
phf12b
Name
(RefSeq) PHD finger protein 12
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900101 (phf12b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
108900101 (phf12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHF12_MRG_bd
PHD
PHDvar_NSD
PHD_2
FHA
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
108900101
NCBI-ProteinID:
XP_018556466
UniProt:
A0A4W6C4Z6
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All DBs
Position
LG21:complement(27485075..27499392)
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AA seq
1031 aa
AA seq
DB search
MWDKMETPTIVYDLDTSGGLMEQIQTLLAPPKSEEVEKRNRKLVRDVRRSGRATNHDTCD
SCREGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCNVRKKKREQKSEQTNGLP
ERSSSKRSASPAVELEINAGPLRLDGLPPGAGAAGPGLRVAQVRLLDRRTSSRPSSRPGT
PTSNTSSTPTPSEEQNDGEEEAAEPEDEVQGTELDCATLSAPTPRLLKRPFQLLIAAAME
RNPTQFQLPSELTCTTALPGSSKRRKKEELLGKPFRRPQHELDPNGLVPLPVKVCFSCNR
SCRLAPLIQCDYCPLLFHMDCLDPPLTALPAGKWMCPNHVEHLVLNQKSLSLSSRCQLFD
QFQDRMSQHAVKLDFLRRVHRRNAPNRRTTLQHNKKTIKVPDAIKSHYQNPPPMLLPAGV
HQVELVCSGVPEHQPSKHLTTEAEQQEWLQDVIALQCSIMRHISIKQNASPTASTPSSVT
LPTESESEQKTSTKSCATSEGMKTQASSGRTSSPDLCSKPCSTPADPQGASLLRDTPAVC
QCSMTPCQNCRKPNGPLAEECQPPKANGPVDCNSSSDTCRQADLQCRVKPSTTPPDSAPT
SGLVNHIGAKTVKKEPESTTEVCAQKNCPTALTIWPHSSQQNHRNQTVLQEACMSSNEKP
SYSITSSARSDTPPKGNQEHDSTKLRSSSPTQDIKAGPGLMDSIANLSSCMKDGKDDDGG
IELDKLDAEMIKLLAWQRIQQLFPPKAPSTLLPPATSNAPKTPSPHLDSQKKVQARAVFY
PLTGKGGAVSMCYRTLYIGSGADMDVCLTNYGYCNYISGKHACIFYDENTKHYELLNYSE
HGTTVDNVLYSCDFSEKVSPSLPSGLVAKVQGIIRRSKKREEGESPSSVVGLLPVGGVMS
SQPHGSTELLCTCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQFVFSITEFAGKQPK
EEPTATSATSCASTTTSSNAASTTTNTTPNSTSTPPLPSTATVSSPSSQDEADTETVPPH
QVPVLHSNSVP
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacaaaatggagaccccgacgattgtgtacgatttggatacctctgggggctta
atggagcaaatccaaacattgctggcgcccccaaagtccgaggaggtagagaagaggaat
cggaagttggtaagagacgtccgaaggagcggcagggccaccaaccatgacacctgcgat
agttgccgggaggggggagacttgctgtgctgtgaccactgccctgcagcattccacctc
cagtgctgtaacccaccactaagtgaagaaatgcttcccccaggggaatggatgtgtcat
cgctgcaatgtacggaaaaagaagcgggagcagaaatcagaacaaaccaacggcctacca
gagaggtcctcgtccaagcgctctgcatccccagccgtggagcttgagattaatgctggc
ccactgcggctcgatggcctgcctccaggggctggagcagcgggaccaggtttacgagtg
gcccaggtacgccttttggatcgcaggacaagcagtagacctagcagccggcctgggaca
cccacctccaacacttcatccaccccaaccccgtctgaggagcagaatgatggagaggag
gaagcagctgaacctgaggatgaagttcagggcacagagcttgactgtgctacattgtct
gctccaacaccacgccttctcaagaggccctttcagctgctaatagcagctgctatggag
agaaaccctacacagttccagctgcccagcgagctcacctgcaccactgcactgccaggc
agcagtaaacggaggaaaaaagaagagctactagggaagccattccgaaggcctcagcat
gaactggatcctaatggtctggtccctctaccagtcaaagtctgcttttcatgcaacagg
agttgcaggttggctccactgatccaatgtgattattgtccccttctgttccacatggac
tgtctggaccccccactcacagctttacctgctggaaaatggatgtgtccaaaccatgtt
gagcacttagtgctgaatcagaagagcctgagtctgtccagccgctgtcagctcttcgac
cagttccaggacaggatgtcacagcatgctgtcaagttggactttctgcgtagagtccat
cgtcggaacgcacccaaccgacgcaccaccctccagcacaacaagaagaccatcaaggtt
ccagatgccattaagtcccactaccagaatcctcctcccatgctgcttcctgcaggagtg
caccaggtggagctggtttgtagtggtgttcctgaacatcagccgtcaaagcacctcacc
acagaggccgaacagcaggagtggcttcaggatgtcattgccctccagtgcagcatcatg
cgacacatatccatcaagcagaatgcttcacccacagcatccaccccgtcatcagtaaca
ttgccaacagaatcagagtctgagcagaaaaccagtactaaatcttgtgcaacatcagag
ggcatgaaaactcaggcctcttcaggaaggacttcttcccctgacctctgctctaaaccc
tgcagtacacctgctgacccccagggggcctctcttttaagggacaccccagctgtttgt
caatgcagcatgacaccatgtcagaactgtaggaaacccaatggacctctggcagaggag
tgtcagcctcccaaagccaatggacctgtagactgtaacagttcctcagacacctgcagg
caggctgacctgcagtgcagagtgaagcctagtacaacacccccagattcagctcctacc
tctggtctggtgaaccacataggtgcaaaaacggttaaaaaggagcctgaaagcactaca
gaggtctgtgctcagaaaaactgccctactgccctgacgatatggccccatagcagccag
caaaaccacaggaaccagacggtgctccaggaggcgtgtatgagcagcaatgaaaaaccc
tcctactccatcaccagcagtgcccgctcagacacaccacctaaaggcaatcaggaacat
gactcaaccaagctgagatcatcatcacctactcaagatataaaggctggacctggacta
atggactccatcgctaacctgtccagctgtatgaaagatggaaaggatgatgatggaggg
atcgagctggacaaactggatgcagaaatgatcaagctcttggcctggcagaggatccag
cagcttttcccccctaaagcacctagcactctgcttcccccagcaaccagcaatgcccca
aaaactccatcaccccaccttgatagtcagaagaaggtgcaggcccgggctgtcttctac
ccactgacaggaaaaggaggagctgtcagcatgtgttataggacgttatacataggatct
ggagctgacatggatgtgtgccttacaaactatggttattgcaactatatatcggggaaa
catgcctgtattttctacgatgagaataccaagcattatgagctgctcaactacagtgag
cacggcaccacggtggacaacgtcctctactcatgtgacttctctgagaaggtctcacca
tctctacccagtggcctggtggccaaagtgcaaggcatcattcgtcgcagtaagaagcgc
gaggagggtgagagtcccagctctgtggtgggtttgttgccagttggtggagtgatgagc
agccagcctcacggcagcaccgagctgttgtgcacctgtaaggcaagcagttccagcctg
atcggaggcagtggggcagggtgggagggcacagctctgctccaccatggcagctatatt
aaattgggctgccttcagtttgtcttcagcatcacagagtttgctggtaagcagcccaaa
gaggagccgaccgccacatccgccaccagttgtgctagtaccaccaccagcagcaatgca
gcaagcaccactaccaacaccacccccaactccacctccacaccaccactgcccagcact
gccacagtgagcagcccttccagccaggatgaggctgacaccgagactgtccctccccac
caagtgcccgtactgcactccaactctgttccgtaa
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