Lates calcarifer (barramundi perch): 108900127
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Entry
108900127 CDS
T04895
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108900127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108900127
04031 GTP-binding proteins [BR:
lcf04031
]
108900127
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
108900127
Others
Specific organelles associated proteins
Auto phagosome
108900127
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108900127
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
108900127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
SRPRB
PduV-EutP
AAA_16
NACHT
G-alpha
RsgA_GTPase
Septin
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
108900127
NCBI-ProteinID:
XP_018556501
UniProt:
A0A4W6DG96
LinkDB
All DBs
Position
LG5:complement(25875101..25882240)
Genome browser
AA seq
339 aa
AA seq
DB search
MPARDLINPPPSDSSHHYAVRRNAAHSHSSDSRSSTLCRVYWELAVGKLARLLQQNACFS
EKSRHIIVYTCGCASLKTSREVLAFCLRQNSLRTACAMDSSLEFSSSLGSVSSLLTRCRT
FKVLVIGDSGVGKTCLTHRLCAGQFPSRVEATIGVDFRERLLDIDGERIKLQLWDTAGQE
RFRKSMVQHYYRNVHAVLFVYDVTCPASFSGLIAWIEECRRNSLGQEIPRFLVGNKSDLR
DSSRTSGQVCQERAMSFAKAHGMMFFETSAKNLQMKRVNGQRGDREVSYQQDKVEDIIIA
VGAKLKRQKKPSATTALTHSGSFKLLNKKKTEKEQWTCC
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcgtgatttaatcaatcctccaccctcagactccagccatcactatgctgtc
agacgaaacgccgcacactcccactcctctgattcacgctcatcaacgctgtgcagagtt
tactgggaacttgcggtcgggaaacttgcgcggctcctccaacagaacgcgtgtttttcc
gaaaagtctcgccacattattgtttacacctgcggctgtgcatctttgaaaacctcaagg
gaggttttagcattttgtcttcgacagaattcactgcgaacagcttgtgcgatggactca
tcgcttgagttttccagctcgttgggcagcgtgtcctccctgctaacccgctgtcggacc
tttaaagtgctggtgatcggagactctggggtggggaagacctgcctcacgcaccgactg
tgcgccggacagttccccagcagagtggaagccaccatcggggtggacttccgcgagaga
ctgctggacattgatggagaaagaattaagctccagctgtgggatactgcaggacaggag
cgctttcgtaagtccatggtgcagcactactaccggaacgtccatgccgtgctctttgtt
tatgatgtcacctgccctgctagtttcagtggcctgattgcctggatagaggagtgcagg
aggaactccctgggacaggaaatccccagattcctggtgggtaataagagtgacctccgt
gattccagcaggacctcaggccaggtgtgccaggagcgggcgatgagctttgccaaggcc
cacggcatgatgttttttgagacatctgccaagaatctgcagatgaagcgcgtgaatgga
cagcgaggtgacagggaggtttcatatcagcaggataaggtggaggacatcatcatcgct
gtcggtgccaaactgaagcgacagaagaaaccttccgcaacaaccgctttgacacacagt
gggtcctttaaactcctgaacaagaaaaaaactgaaaaagagcagtggacctgctgctga
DBGET
integrated database retrieval system
