Lates calcarifer (barramundi perch): 108900140
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Entry
108900140 CDS
T04895
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108900140 (ctnnd1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
108900140
NCBI-ProteinID:
XP_018556525
UniProt:
A0AAJ8B5L3
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Position
LG5:complement(25766895..25791707)
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AA seq
940 aa
AA seq
DB search
MEQCASTASLLASVREQERQFEMLSRALEEERRSCAGTLPRPLPNMQNGRIPCDADIERL
TLNEGYINGTHHFRMEPGQMVQESYTVEEEPQESPPVVSVETTEDGTTRRTETTVKKVVK
TTTTRTVIPSVSDTLSLDGGGSVTGMSAYSAPMDRVYRQGPATGMPMDYPTHTVPRNYHY
GPPGGYDDYRAGPPSETYASLTRGARMDDRYRPVHPDGYRTLDPSYRAPSRNQLDPYAAQ
PQVGRMGSAMELSSIPRFVPEPYGLEDDQRSMGFDEPDYGMGHPMHYSTVPRNHHAFPHG
PPRRTGSYEGTLDGDMSGPGDMYYWGGGAPLAQGERGSMASLDSTLRKGPGPGGWRQPEL
PEVIAMLNYRLDPVKSNAAAYLQHLTYKNDKVKSDVRRLKGIPALVSMLDNPNKEVHYAA
CGALKNISYGKDPDNKIAIKNCDGVPALIRLLRKTHDQDLTDTITGTLWNLSSHDSVKME
IVDHALHALSDEVMVPHSGWERGSNGAGGGEENCKPRHLEWETALTNTAGCLRNVSSERS
EARRKLRECTGLVDSLMYIVQSQIDCKDVDNKLIENSVCLLRNLSYHVHREIPGCERYQE
AAPINQGPAPSSQKGGCFSSRKGKDEWFSKGRKDEDAAADIIDIPKRTTPAKGYELLYQP
EVVRIYTSLLKESKNPTVLEASAGAVQNLCAGRWTYGRYIRALLRQEKGLPMMTELLAHG
NDRVVRAMSGALRNLAIDARNRDLLGKHAVPHLVANLPGGGQSQPVRALSEETVVSVLST
LHEVLGSSLEAAKTLRASQGIERLVLINKDGNRSEREVRGAGLVLQTVWGYKELRRTLEK
DGWKKTDFMVNLNPPSNNTRANGGYEDSTLPLIDKGSKGDREMIPMNDFGPGENAYSTLD
QRGRRNTLDNTLEPADKDAVQGGMYGERQASLPLMDSYDG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgcgagtacggcctccctgctggcctcggtgcgggagcaggagaggcag
tttgagatgctgagccgagctctggaggaggagcggaggtcgtgcgccggcaccctgccc
cgccccctccccaacatgcagaacggccgcattccttgtgatgcagacatagagaggctg
acactcaacgagggttacatcaacgggacacatcacttcaggatggagcctggtcagatg
gtgcaggagtcctacacggtagaggaggaaccccaggagtccccacctgttgtctctgtg
gagaccactgaagatggcaccacacggcgcacagaaaccacggtaaagaaagtagtaaag
accaccaccactcgtacagtcatcccctctgtgtcagacacactttccctggatggtggg
ggttcagtaacaggcatgtcagcctatagtgcgcccatggaccgggtctacaggcagggt
cctgccacaggcatgcctatggactaccccactcacactgtgcccagaaactaccactac
ggacctccagggggctatgacgactaccgcgcaggacctccatctgagacctacgcaagc
cttaccaggggtgctcgcatggatgatcgctacagaccagtccatccagatgggtacaga
actctggatccgagctatagagccccaagcaggaaccagctggacccatatgctgctcaa
ccacaggttgggcgcatgggaagtgctatggagctatcttctatcccaaggtttgttcca
gagccttacggtctggaggatgatcagcgcagcatgggctttgatgagcctgactacggc
atgggacacccaatgcactatagcactgtgccccggaaccaccacgcattcccccatggg
cccccacgcagaactgggagttacgagggcaccttggatggtgacatgagcggtccaggg
gacatgtactattggggtggaggagcgcctctggcccagggtgaaagaggaagcatggcc
tcattggacagcactctaaggaaaggtccgggccctggtggttggcgtcagccagagctg
ccagaggtcatcgccatgctcaactacaggctagacccggtcaagagcaacgcagctgca
tacctgcagcatctcacttacaagaatgataaggtgaagtctgatgtgcgtcgtctgaaa
ggcatcccagctctggtttctatgcttgacaacccaaacaaagaggttcactacgcagcc
tgtggagcgctaaagaacatctcatatggcaaagatccagacaacaagatcgccatcaag
aactgtgatggagtgcctgctctgatcaggctgctgagaaagacccacgaccaagacctc
actgacactatcacagggacgctgtggaacctgtcgtctcatgactctgtgaaaatggaa
attgtggaccatgcactgcacgccctctccgatgaagtgatggtgccccattcaggatgg
gagcgagggagcaatggagcaggaggcggggaggagaactgcaagcccagacaccttgag
tgggagacggccctcaccaacacagcaggctgcttgagaaatgtgagttcggagcgaagt
gaggcgaggaggaagctgagggagtgcacaggattggtcgattcgctcatgtacattgtc
cagtcccagatcgactgtaaagatgttgacaataagttgatagagaacagcgtgtgtctg
ctgaggaacttgtcttatcacgtgcaccgcgaaatccctggctgtgagcgataccaggag
gccgcgcccatcaaccagggccccgccccctccagccagaagggcggctgcttcagctcc
cgaaagggcaaagatgagtggttttccaaaggtaggaaagacgaggatgcagctgcagat
ataatagacattccaaagaggaccacgcctgctaaaggctatgagctgttgtaccagccg
gaggtggtgcgcatctacacctctctgctaaaggagtctaagaaccccactgtgttggaa
gcctcagccggagctgttcagaacctgtgcgccggccgctggacttatggacgatacatc
cgtgccttgctgcgtcaggagaagggtctacccatgatgactgagctgctggcccatgga
aatgaccgagtggtccgagccatgtctggagccctccgcaacctggccattgatgcgcgc
aatagagatctactaggtaaacacgcggtgcctcacctggtggccaacctgcccggtggt
ggtcagagtcagcctgtgcgagcgctgtcagaagagacggtggtgtcagtattgagcaca
cttcatgaggtgctgggctctagcctggaagcagccaagaccctcagggcctcgcagggc
atcgagagactggtgctcattaacaaggatggtaatcgctctgagcgcgaagtacgtggt
gctggcctggtgctgcagacagtgtggggctacaaggagctgcggcgcactttggagaag
gacggctggaagaagacagacttcatggtcaacctaaaccctcccagcaacaacactaga
gccaatggaggatatgaggacagtactctgccgctcatagacaaaggcagcaaaggggac
cgggaaatgattccaatgaatgactttggaccaggtgagaatgcctactccacactggac
cagagagggagaaggaacactctggataacacactcgaacctgctgacaaagatgcagta
cagggagggatgtatggggagaggcaggcctctttgcctctaatggattcttacgatggt
tag
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