Lates calcarifer (barramundi perch): 108900163
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Entry
108900163 CDS
T04895
Symbol
raf1a
Name
(RefSeq) raf-1 proto-oncogene, serine/threonine kinase a isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04068
FoxO signaling pathway
lcf04140
Autophagy - animal
lcf04150
mTOR signaling pathway
lcf04210
Apoptosis
lcf04218
Cellular senescence
lcf04270
Vascular smooth muscle contraction
lcf04370
VEGF signaling pathway
lcf04371
Apelin signaling pathway
lcf04510
Focal adhesion
lcf04540
Gap junction
lcf04625
C-type lectin receptor signaling pathway
lcf04810
Regulation of actin cytoskeleton
lcf04910
Insulin signaling pathway
lcf04912
GnRH signaling pathway
lcf04914
Progesterone-mediated oocyte maturation
lcf04916
Melanogenesis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108900163 (raf1a)
04012 ErbB signaling pathway
108900163 (raf1a)
04370 VEGF signaling pathway
108900163 (raf1a)
04371 Apelin signaling pathway
108900163 (raf1a)
04068 FoxO signaling pathway
108900163 (raf1a)
04150 mTOR signaling pathway
108900163 (raf1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108900163 (raf1a)
09143 Cell growth and death
04210 Apoptosis
108900163 (raf1a)
04218 Cellular senescence
108900163 (raf1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108900163 (raf1a)
04540 Gap junction
108900163 (raf1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108900163 (raf1a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108900163 (raf1a)
09152 Endocrine system
04910 Insulin signaling pathway
108900163 (raf1a)
04912 GnRH signaling pathway
108900163 (raf1a)
04914 Progesterone-mediated oocyte maturation
108900163 (raf1a)
04916 Melanogenesis
108900163 (raf1a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
108900163 (raf1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108900163 (raf1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108900163 (raf1a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108900163 (raf1a)
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
108900163 (raf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RBD
C1_1
Kinase-like
zf-RING-like
ABC1
Pkinase_fungal
C1_2
Kdo
Motif
Other DBs
NCBI-GeneID:
108900163
NCBI-ProteinID:
XP_018556569
UniProt:
A0A4W6EV13
LinkDB
All DBs
Position
LG6:18593236..18608604
Genome browser
AA seq
677 aa
AA seq
DB search
MEHLQGAWKNLSNGFGMRDSAFEGPCLSPTMVQGFPCQRRSSDDSKMPDSKTSSTIRVYL
PNQQRTVVNVRPGMTLHNCLIKALKVRGLQPQCCAVFRLHPGQRSKKLRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTYLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLCPTPGESGAPSLPPLTSRRMRESLTRFPSSAHRYSTPHAFNYTTSYP
PTGGGLSQRQRSTSTPNVHMVSTTLPVDSSMIELEWLNTSPSSWCHRFWLKRKVGIVHFS
QSFVEASPESPEKDAMRDHDSAGSSPNQSPTGWSQSQCKAPAPAQRERAPSFNTHEKNKI
RPRDKRDSSYYWEIEASEVYLHSRIGSGSFGTVYKGKWHGDVAVKILKVTDPTPEQFQAF
RNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHIHVLETNFKMIQLMDIAR
QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKARWSGSHQVEQPSGSIL
WMAPEVIRMQDNNPYSFQSDVYSYGIVLFELMTGELPYSQIANRDQIIFMVGRGYLSPDL
SKLYKNCPKAMKRLVADCIKKSKDERPLFPQILSSIELLQHALPKINRSASEPSLHRASH
TEDINACTLTSTRLSVF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctccagggagcgtggaagaatctgagcaacggcttcggaatgagggactct
gccttcgagggcccatgcctttcaccaaccatggtgcagggctttccctgccagcgtcgc
tcctcagatgacagcaagatgcctgactccaagactagcagcactatccgagtctacctc
ccaaaccagcagcgcaccgtggtaaacgtgcgaccgggtatgactctgcacaattgcctg
attaaagcattaaaggtgcgaggtctgcagcctcagtgctgtgctgtcttcaggctgcat
ccaggacagagaagtaaaaaactacggatggattggaatactgactccacctctctgatt
ggggaagagctgctggtggaggttttagatcacgttcctctgacgacgcataattttgtt
cggaaaacatatctgaagttggcattctgtgatatttgccagaagtttcttttgaatggt
ttccgttgccaaacatgtggctacaaattccatgagcattgtagcaccaaagtgcccaca
atgtgtgtggactggagcaatatcagacaactcctgctgtgtccaacacctggtgagagc
ggtgccccatcactgccaccgctgacatccaggcgaatgagagaatccttaacacggttt
ccaagctcagcccaccgatattccacccctcatgccttcaactacaccacatcctaccca
cccacaggcggcggtctctcccagaggcagcgctccacttccacgcccaatgtccacatg
gttagcactaccctgcctgtagacagcagcatgattgagctagaatggctgaatacctcc
cccagctcctggtgccatagattctggctgaagaggaaagtaggtattgtgcacttctcc
cagtcttttgttgaggcctcacctgagagtccagaaaaggatgcaatgcgtgatcatgac
tcggcagggagctcccccaatcagagccctacaggctggtcccagtcccaatgcaaagcc
cctgcacctgcccagcgagagagagccccgtccttcaacacgcatgagaaaaataaaatt
aggcctcgggacaagcgggactctagttactactgggagattgaggccagtgaggtgtat
cttcattcccgcatcggttcgggctcctttggaactgtatacaaagggaaatggcatggt
gatgtagcagttaagattttaaaggtgactgaccccacaccagagcagttccaggcattc
agaaatgaggtggctgtgttgaggaaaacacgacatgtcaacatcctgttgttcatgggc
tacatgacgaaggacaacctggccattgtgacccagtggtgtgagggcagcagcctctac
aaacacattcatgtcctggagacaaacttcaagatgatccagctcatggacatcgccagg
cagacagctcagggcatggactatctgcatgcaaagaacatcattcatcgtgacatgaag
tccaacaacatcttcttgcatgaagggctcacggtgaaaattggggactttggtcttgcc
acagtgaaggccaggtggagcggctcccatcaggtggagcagccttctggatccattctt
tggatggctcctgaggttatccggatgcaggataacaatccctacagcttccagtctgat
gtctattcctatggaattgttctctttgagctcatgacgggagagctcccgtactcccag
atagcaaatagagatcagatcatcttcatggtaggaagaggctatttgtccccagacctc
agtaaactctacaagaactgccccaaagccatgaaacggctggtggctgactgcatcaag
aagtccaaggacgagaggccgctcttcccacagatcttgtcctccattgaacttctccag
catgccctccctaagataaaccgcagtgcctcagaaccgtccctgcacagagcctctcac
actgaggatatcaatgcctgtactctgacctccaccagactgtctgttttctag
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