Lates calcarifer (barramundi perch): 108900175
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Entry
108900175 CDS
T04895
Symbol
irf10
Name
(RefSeq) interferon regulatory factor 10
KO
K09445
interferon regulatory factor 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900175 (irf10)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108900175 (irf10)
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Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108900175
NCBI-ProteinID:
XP_018556595
UniProt:
A0A4W6EUU5
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Position
LG6:18753836..18760546
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AA seq
405 aa
AA seq
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MEEGAKLHLKEWLIAQIESGKYEGLCWEDEDKSMFRIPWKHAAKKDYKQTEDAALFKAWA
VYKGKYREGRDKADPTMWKTRLRCALNKSTDFQEVPERNQLDITEPYKVYRIQHDNGPAK
PAESPQIKDQVIIQAKRSPKSPGFLDKQLQFQNESFQANEEEEKPFTEDLMREHMYCELT
EKKTQNRVPVPTAFLNPPLTISDFRMQVILLYQGQRVMTVTTRSPDGCFILQGRVPLGNE
RIYGPCTAQQLSFPSPGSISLPSSMAEAMARLLCHLERGVLLWVAPDGVFIKRFCQGRVY
WSGPMAEHTDRPNKLEREKTFKLLDIQTFVRDLQSCLQGKGPTPSYEIELCFGEEYPDPN
VPKTKKLIMAQVVPLFAVELLQGLTLGETEEKQLALGANTEEEKM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggagccaagttgcacctgaaagagtggctgatagctcagattgagagtggg
aaatatgaaggactgtgctgggaggatgaggacaaaagtatgttcaggatcccgtggaaa
cacgcagccaagaaggactacaaacagacggaggatgcagctctcttcaaggcctgggct
gtgtacaagggcaaatacagggaggggagggataaagctgaccccaccatgtggaagacc
cgtctccgctgtgcactcaacaagagcacagacttccaggaggtccctgaacgcaaccag
ctggacatcacagagccatacaaagtctaccggattcagcatgacaatgggcctgccaag
ccagcagagtctccacaaataaaggatcaagtgattatccaggctaaaaggtctccaaag
agccctggttttctggacaaacagcttcaatttcaaaatgaatcatttcaagcaaatgaa
gaagaagaaaaaccatttactgaggatctgatgagggagcacatgtactgtgaattaaca
gagaaaaaaactcaaaatcgggtccctgttcctactgccttcctcaaccctccactcact
atttcagattttcgtatgcaggtgatattgttgtaccagggccagagggtgatgacagtg
accaccaggagtccagatggatgtttcatcctgcagggccgtgtccctctgggaaatgag
cgtatctacggaccctgcaccgcccagcagctctcgttcccttccccgggctccatatcc
ctgccatcaagcatggctgaagcaatggctcgccttctttgtcacctggagaggggtgtg
ctattatgggtggccccagatggggtgttcatcaagcgtttctgccagggcagggtgtac
tggagcggtcccatggccgaacacactgaccggcccaacaaactggagcgagaaaagacc
ttcaaactgctggatatacaaacatttgtccgtgatcttcagagttgtttacaagggaaa
ggacctacaccttcttatgagattgaactctgctttggagaggagtatccagaccccaat
gtaccaaaaaccaagaagctgatcatggcacaggtggtgccattgtttgcagtggagctt
ctgcaggggctcaccttgggggagactgaagagaagcagctggctcttggcgccaacaca
gaggaagagaagatgtag
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