Lates calcarifer (barramundi perch): 108900182
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Entry
108900182 CDS
T04895
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900182
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108900182
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
108900182
NCBI-ProteinID:
XP_018556615
UniProt:
A0AAJ7VJ49
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Position
LG6:complement(18701783..18708887)
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AA seq
390 aa
AA seq
DB search
MGSRAPELSSEIDKLRVQLLNNVQVLTDCLRVEEEISHREILTRIENIILGIVTSLSKDE
APVLALPNRSSWANVSFDSAIGLQMSSGSSVSTIRSDCPSSVTKFAQILKILSVIYRLVQ
SNSYATKRDIYYNNTQLFGSQTTVDSIVDDISCMLKVPRRSLHVLATSKGLIAGDLRYME
EDGTRIDCHSSSAAVAVSSNISGIRNIVSSAKFVMIVEKDATFQRLLDDDFCTKLCPCII
ITGKGVPDVNSRLMVRKLWDTLHIPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVP
SVMWLGLLPSDLQRLRVPEDALIPLTKRDESKLSSLLKRPYLTSQPDWQKEMELMQQTRV
KAEIQSLAAIAPDFLTSIYLPNKLRYGGWV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggatcccgggcaccagaactgtcttctgaaattgataaactccgggttcagctgctg
aacaatgtccaagtcctgacagattgcctgcgagtcgaggaggaaatcagccacagggaa
attttgacccgtattgaaaacataatcctaggaatagtgaccagtctgtccaaagatgag
gcccctgtcctggcactgcccaacaggtccagctgggccaacgtcagttttgacagtgcc
atcgggcttcagatgagttcaggaagttctgtcagcaccattaggagcgactgtccttca
tctgtcaccaaatttgcacaaattctcaagattctttcagtcatctacagactcgtgcag
agcaactcatatgctacgaaaagagacatctattacaacaatacacagctgtttggttca
cagacaacagttgacagcattgtggatgatatttcctgcatgctaaaggttcctcgcaga
tcacttcatgtgttggccacgtccaagggattaatcgcaggtgatctgcgttacatggag
gaggatggcacaaggatcgattgccactccagttctgctgctgttgcagtttcgtcaaat
attagtgggattagaaatattgtatcatctgcaaaatttgtgatgatagttgagaaggat
gcaactttccagagactgctagatgacgacttctgcacaaagctctgtccttgtatcata
atcacaggtaaaggcgtgccagatgttaacagcaggttgatggtgaggaagctttgggac
acgctgcacatccccatctttgccctggtggatgccgaccctcacggcattgagatcatg
tgtatctacaagtacggatcagtggccatgtcgtttgaggcccacagcctaaccgtcccc
agcgttatgtggctaggcctcctcccctctgacctccagaggttgcgggttccagaggac
gctctgatccccctcaccaagagagatgaaagcaaactcagtagcctccttaaaaggccg
tacttaaccagccaaccagactggcagaaagagatggaactgatgcagcagacgagggtc
aaggctgaaatacagtccctggcagccatagcgcctgatttcctcaccagcatttacctg
cccaacaagctgcgttatgggggctgggtatga
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