KEGG   Lates calcarifer (barramundi perch): 108900190
Entry
108900190         CDS       T04895                                 
Name
(RefSeq) cadherin-4 isoform X1
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108900190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108900190
Cell adhesion molecules [BR:lcf04515]
 Cadherins
  Major cadherins
   108900190
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_CELSR2_9th DUF2254 Cytomega_TRL10
Other DBs
NCBI-GeneID: 108900190
NCBI-ProteinID: XP_050927270
UniProt: A0AAJ8B6G8
LinkDB
Position
LG6:complement(18882852..19130297)
AA seq 933 aa
MRTDFALVLTAALLLDTFWRNNGEHVSKGPCRPGFSQSFYSVLISRDVLQGQGILKDTTV
SSQKVKFDNCMGNEAVVFRSSDPVFSVRTDGSIFAQGEGASLDEPVQFKLTASGPHTHVW
ETVVQLALIDPPSPQQNENEVMMEDGKVAEGKERKDVFQAPPPVIMFSGSGLNSSKGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFNIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENRV
DVVVANLTVIDADQAHSPNWNAIYQIISGDQFGHFTIRTDPVTNDGMVTVVKPVDFEMNR
SFMLKVAVSNQAHLASGIQSSLQSTADVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSL
TTFSASDPDRLHMQSIRYSKLNDPADWLSINRTNGQIVTTGMLDRESIYVKNNIYEATFL
ATDNGSPAASGTGTLQIYLIDINDNPPALIPKESQICERMNKNVNGVNITAADADTDPNA
GPFVFELPNFPTSIRRNWTISRISGDYARLGLRYQVYLEPGVYEVPIIVSDSGNPPLSNR
SVIKVKVCPCDENGDCTTLGAVAAAGLGTGAIISILICVIILLSMVLLFVVWIKRREKER
QTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDERP
IIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSL
NSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgagaactgacttcgctctggtcctgacagcagcccttcttcttgacacattctggagg
aataatggggagcatgtttccaaaggtccctgccgacctggcttctcacaaagcttctac
tctgtgctgatttcaagggatgtactgcaaggccagggcatacttaaagataccacagta
tcatcacaaaaagtgaagttcgacaactgcatgggtaacgaagcggtggttttccggagc
agcgacccagtcttcagcgtgcggacagatgggtccatctttgcccagggagagggagcc
agcctagatgaaccggttcagtttaaactgacagcaagtggtccacacacacatgtctgg
gagactgtggtccaactggcactgattgacccaccatcacctcaacaaaatgaaaatgag
gtcatgatggaagatggaaaagtcgctgagggaaaagagaggaaggacgttttccaagca
ccgcctcctgtcatcatgttctcagggtctggcctgaacagctccaagggtctacggagg
cagaagagggactgggtgatcccaccaatcaacgtggcagaaaattctcgaggaccgttc
cctcagatgctcgtcagcattcgttcagaccaggaccaggacatctcaatccgatacagc
atcactggggtgggagcggatcaacctcctaatgaggtgttcaatatcgaccctgtgctt
ggaaagatgttcgtcacaaaacctcttgatcgagaacatcgctcctcataccatttgcgt
gcccatgccgtggacatgaatgggaaccaggtggagaaccccatcgatctatacatcttc
gtcatcgacatgaatgacaacaggcccgagttcaaaaaccaggtctacaatggctctgtg
gatgaaggctccaaaccaggaacatatgtgatgcacctgtcagcgttcgatgccgacgac
aacaccaccgctaatggaatggtgcgctatcgaatcctgtcccagacgccgcacagcccc
atccctaacatgttcaccatcaacagcgagaccggcgacattgtgacggtggcacctggt
cttgatcgagagaaagtgtcccagtataccatcatcgtgcaagccacggacatggagggc
aacctcaacttcggcctatccaacacagccaccgccatcatcactgtcacggacatcaat
gacaatcctccaatgctgacctccagaactttttctggtgaagtcccagagaaccgagtg
gatgttgtggtggctaatctgacggtgatcgacgctgaccaagctcattcgcctaactgg
aacgccatctatcagatcatcagcggagaccagttcgggcacttcaccatccgcactgac
cctgtcaccaatgatggcatggtcaccgtagttaagccagtagactttgagatgaaccgt
tccttcatgctgaaggtggcggtgtccaaccaggcccacctggccagtggcatccagtct
tcactacagtccacagctgacgtcaccatatctgtccaggacgtcaatgagcccccttac
ttccccacaaacccaaaacacatccgctttgaggagggagtccctgccggcaccagcctg
acgaccttctccgcctcagatcccgaccgactgcatatgcagtcaatcaggtattcaaag
ctgaacgaccctgctgactggttgtccatcaacagaaccaacggtcagattgtaaccaca
ggcatgcttgaccgagagtccatctatgtcaaaaacaacatatatgaggccacattcctg
gcaacagacaatggctctcctgcagccagcggcacaggcacgttgcagatctatctgata
gatattaatgacaacccgccggcgctcatacccaaggagtctcagatctgtgagaggatg
aacaagaacgtcaacggtgtcaacatcactgccgctgatgccgacacggaccccaacgct
ggaccctttgtcttcgagctccccaacttccccaccagcatccgacgcaactggactatt
tctcggatcagtggcgactatgcccgtctgggtttgcggtaccaggtatatttggagcca
ggcgtgtacgaggtccctataatcgtgtcagactcggggaaccctccattgtccaacagg
tcggttatcaaagtaaaggtgtgtccctgcgacgaaaatggagactgcaccactctcggg
gccgtggcagccgctggcctgggaaccggagccatcatctccatcctgatctgcgtcatc
atactgctcagcatggtgctgttgtttgtggtgtggatcaagcgcagagagaaggagagg
caaacaaagcagctgctcattgaccctgaagatgatgtcagagacaacatcctcaaatat
gacgaagagggaggaggagaggaggaccaggactatgacctgagccagctgcagcagccc
gactccttggagcacatcatcagcaagccccctggtgtccgcagggtggatgagcgtccc
atcatccccgagtcccagtacccaattagacctgttgtgccccatcctggagacatcggg
gacttcatccacgagggtctgcgagcagcagacaatgaccccactgctcctccttatgac
tccctgctggtgtttgactatgagggcagcggctccaccgctggctctgtcagctcgctt
aactcctccagcacgggggaccaggactatgactacctcaacgactggggcccacgcttc
aagaagctggccgacatgtacggaggaggggatgatgattaa

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