Lates calcarifer (barramundi perch): 108900214
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Entry
108900214 CDS
T04895
Name
(RefSeq) acid-sensing ion channel 1
KO
K04829
acid-sensing ion channel 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108900214
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
108900214
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GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
108900214
NCBI-ProteinID:
XP_018556680
UniProt:
A0A4W6F0F2
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Position
LG6:complement(19675596..19725852)
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AA seq
494 aa
AA seq
DB search
MDLKVETEEMDSNQPPPIEVFAHSSTLHGISHIFTYERFCIKRCLWVVFFLGSLTFLLYV
CVDRIHFYLEYPHVTKLDEVTTPVMTFPAVTFCNLNAFRFSRVTRNDLYHAGELLALLNQ
RYEIRDIHLVEESVLESLKVKADFHNFKPRPFNMREFYDRTGHDINDMLLSCHFHGTECR
AEDFKVVFTRYGKCYTFNAGGEGRTPLITTKGGMGNGLELMLDIQQDEYLPVWGETDETS
FEAGVKVQIHSQDEPSFIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKVTPMDSDFF
DSYSITACRIDCETRYLVDNCNCRMVHMPGDAPYCTPELYKECADPALDFLVERDNDFCV
CETPCNMTRYSKELSFVKIPSKASAKYLAKKYNKSEQYIKENILVLDIFFEALNYETIEQ
KKAYEVAGLLGDIGGQMGLFIGASILTILELFDYLYEVIKYKLCRCSDKKHNNNNDQGTV
LSLDDVKCHVSNFH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaagtcgagaccgaagaaatggactcgaatcaacctccacccatagaagtt
tttgcgcacagctcgaccctgcacggaatctcccacatcttcacgtacgaacggttctgc
atcaaacgctgcttgtgggtcgtgtttttcctgggctccttgaccttcttgttgtacgtg
tgcgtggaccggatccacttctacctcgagtacccgcacgtcaccaaattggacgaggtc
acgaccccggtcatgacgttccccgcggtcactttttgcaacctgaacgcgtttcggttc
agtcgtgtgacgcgcaacgacctgtaccacgcaggggagctgctggccctgctcaaccag
aggtatgagatcagggacattcacctggtggaagagagcgtcctggagagcctgaaagtc
aaagctgacttccacaatttcaagccgcgacccttcaacatgcgggagttttacgaccgc
accggtcacgacatcaacgacatgctgctctcctgccacttccatggcaccgagtgcaga
gcagaagacttcaaagtggtcttcactcggtatgggaagtgttacacctttaatgcaggc
ggtgaaggacgcactcccctcatcaccaccaagggaggcatgggtaatggacttgagctt
atgctggacattcagcaggatgagtacctgccagtgtggggagaaacagatgagacatca
tttgaagctggggtcaaagttcagatccacagtcaggacgagccgtccttcattgaccag
cttgggtttggagtggcacccgggttccagacatttgtttcctgccaagaacaaaggctg
atatatcttcctccaccctggggagactgtaaggtgacgcccatggattcagacttcttt
gacagttacagcatcaccgcctgtcgcattgactgtgaaacacggtacctggtggacaac
tgcaactgccgcatggtgcacatgcctggcgatgcaccgtactgcacccccgagctgtac
aaagaatgtgctgacccagctctcgatttcctggtggagagagacaatgatttctgtgtt
tgtgagacaccgtgcaacatgaccagatacagcaaagagctgtcctttgtcaagatcccc
agcaaggcctctgctaaatatcttgcaaagaaatacaacaaatctgagcagtacattaag
gagaacatcctggttttagacatcttctttgaggcgctcaactatgagactattgaacag
aagaaggcttatgaagtggctggacttttaggtgatatcggtggtcagatgggacttttt
attggggcaagcatactcactattctggagttatttgactacctttatgaggtgataaag
tacaagctgtgtcgctgctccgataagaagcacaacaacaataacgaccagggaacggtc
ctgagcttagatgatgtcaagtgccacgtcagtaactttcactag
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